RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 RDH13Q8NBN7 331 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 NEK11Q8NG66 645 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 FIZ1Q96SL8 496 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 NUP58Q9BVL2 599 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 ENC1O14682 589 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 SLC26A4O43511 780 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 CNTN2Q02246 1040 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 SUPT20HL1Q3ZLR7 823 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 C9orf131Q5VYM1 1079 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 CEP63Q96MT8 703 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 RLFQ13129 1914 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 RGS20O76081 388 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 NOL4O94818 638 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 MAPK7Q13164 816 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 GADL1Q6ZQY3 521 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 KIAA1328Q86T90 577 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 BAP1Q92560 729 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 CCDC43Q96MW1 224 aaKnown RBP15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 SYT17Q9BSW7 474 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 ST7Q9NRC1 585 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 GINM1Q9NU53 330 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 STK24Q9Y6E0 443 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 PARP14Q460N5 1801 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 PHIPQ8WWQ0 1821 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 MACROD2A1Z1Q3 448 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 BACH1O14867 736 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 BCRP11274 1271 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 SLC9A1P19634 815 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 CLCN6P51797 869 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 TERF2Q15554 542 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 ZNF771Q7L3S4 317 aaPredicted RBP15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 MNS1Q8NEH6 495 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 DCPSQ96C86 337 aaKnown RBP15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 KIFC3Q9BVG8 833 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 TEX13BQ9BXU2 312 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 TRAF3IP3Q9Y228 551 aa15.49■□□□□ 0.07
CARMIL3-203ENST00000560349 K7ENM7 598 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 IRF6O14896 467 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 P4HBP07237 508 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 YWHABP31946 246 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 EIF4A3P38919 411 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 QARSP47897 775 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 RARRES1P49788 294 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 EDRF1Q3B7T1 1238 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 TDRD12Q587J7 1177 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 CCDC122Q5T0U0 273 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 CCDC42Q96M95 316 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 PAGR1Q9BTK6 254 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 TYW1Q9NV66 732 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 CYP39A1Q9NYL5 469 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 PNMA6AP0CW24 399 aaPredicted RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 ZNF720Q7Z2F6 126 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 DEF6Q9H4E7 631 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 PCIF1Q9H4Z3 704 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 DOCK5Q9H7D0 1870 aa15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 ADARB2Q9NS39 739 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 PUF60Q9UHX1 559 aaKnown RBP15.48■□□□□ 0.07
CARMIL3-203ENST00000560349 SBF1O95248 1867 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 C19orf81C9J6K1 198 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 PDXKO00764 312 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 CALUO43852 315 aaPredicted RBP15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 GHRHRQ02643 423 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 GJB7Q6PEY0 223 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 DNAAF5Q86Y56 855 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 ANKRD13CQ8N6S4 541 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 ZSWIM2Q8NEG5 633 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 C12orf42Q96LP6 360 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 HDAC6Q9UBN7 1215 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 PLAGL2Q9UPG8 496 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 FHOD1Q9Y613 1164 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 TRIM49P0CI25 452 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 TRIM49CP0CI26 452 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 XRCC5P13010 732 aaKnown RBP15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 GFPT1Q06210 699 aaPredicted RBP15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 RAPGEF1Q13905 1077 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 VSIG10LQ86VR7 867 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 ACAD9Q9H845 621 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 BTBD7Q9P203 1132 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 MRFAP1Q9Y605 127 aa15.47■□□□□ 0.07
CARMIL3-203ENST00000560349 A0A1W2PQJ5 194 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 TLR2O60603 784 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 GAP43P17677 238 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 CCND2P30279 289 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 MAP3K9P80192 1104 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 XKR9Q5GH70 373 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 FIGNQ5HY92 759 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 EEPD1Q7L9B9 569 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 NLRX1Q86UT6 975 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 SYCP3Q8IZU3 236 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 FAM133AQ8N9E0 248 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 CSADQ9Y600 493 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 CYLC1P35663 651 aaPredicted RBP15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 KIF11P52732 1056 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms