RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 MPHOSPH8Q99549 860 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 MEIS3Q99687 375 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 ORAI3Q9BRQ5 295 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 CCDC8Q9H0W5 538 aaPredicted RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 NOL6Q9H6R4 1146 aaKnown RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 FAM105AQ9NUU6 356 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 ZIM2Q9NZV7 527 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 NRBP1Q9UHY1 535 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 ACTL7BQ9Y614 415 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 EDC4Q6P2E9 1401 aaKnown RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 CEP170BQ9Y4F5 1589 aaPredicted RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 A0A0A0MRY4 1105 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 CCDC151A5D8V7 595 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 NEMP1O14524 444 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 MAP2K7O14733 419 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 KIF1CO43896 1103 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 EIF3JO75822 258 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 TSPOAP1O95153 1857 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 CRTAMO95727 393 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 TBC1D8O95759 1140 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 NAT1P18440 290 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 ETV3P41162 512 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 GTF2A1P52655 376 aaPredicted RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 GSCP56915 257 aaPredicted RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 AMPD2Q01433 879 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 TUBB2AQ13885 445 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 DIP2AQ14689 1571 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 BRD3Q15059 726 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 ARHGAP29Q52LW3 1261 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 STYK1Q6J9G0 422 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 ZCCHC8Q6NZY4 707 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 FDX2Q6P4F2 183 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 IGF2-ASQ6U949 168 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 SYT10Q6XYQ8 523 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 USP53Q70EK8 1073 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 C14orf80Q86SX3 495 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 REXO1L1PQ8IX06 675 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 FIBCD1Q8N539 461 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 RABGGTAQ92696 567 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 CHMP4CQ96CF2 233 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 C1orf159Q96HA4 380 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 PPP1R13BQ96KQ4 1090 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 PHACTR3Q96KR7 559 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 CAMKK2Q96RR4 588 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 MIPEPQ99797 713 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 TUBB2BQ9BVA1 445 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 UPF3BQ9BZI7 483 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 TRIM8Q9BZR9 551 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 PRDM14Q9GZV8 571 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 FAM107BQ9H098 131 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 NAT10Q9H0A0 1025 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 ZSCAN16Q9H4T2 348 aaPredicted RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 AASDHPPTQ9NRN7 309 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 ANO10Q9NW15 660 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 DACT1Q9NYF0 836 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 SF3B6Q9Y3B4 125 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 RRP15Q9Y3B9 282 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 LRRFIP2Q9Y608 721 aaKnown RBP5.95□□□□□ -1.46
TPM1-222ENST00000560131 AKAP12Q02952 1782 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 MLH3Q9UHC1 1453 aa5.95□□□□□ -1.46
TPM1-222ENST00000560131 C3P01024 1663 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 SBNO1A3KN83 1393 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 JCADQ9P266 1359 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 CRB1P82279 1406 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 GOLGA6L4A6NEF3 574 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 USP27XA6NNY8 438 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 PYGMP11217 842 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 KCNA6P17658 529 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 ITIH2P19823 946 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 CASTP20810 708 aaKnown RBP5.94□□□□□ -1.46
TPM1-222ENST00000560131 PSMA5P28066 241 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 SSTR4P31391 388 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 ECI1P42126 302 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 TMPRSS15P98073 1019 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 UBE4AQ14139 1066 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 ERCC6LQ2NKX8 1250 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 PIK3R6Q5UE93 754 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 E4F1Q66K89 784 aaPredicted RBP5.94□□□□□ -1.46
TPM1-222ENST00000560131 ANKRD34AQ69YU3 496 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 CC2D1AQ6P1N0 951 aaPredicted RBP5.94□□□□□ -1.46
TPM1-222ENST00000560131 KRBA2Q6ZNG9 492 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 RSRC2Q7L4I2 434 aaKnown RBP5.94□□□□□ -1.46
TPM1-222ENST00000560131 ZBTB46Q86UZ6 589 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 CNTROBQ8N137 903 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 CNTD1Q8N815 330 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 CCDC191Q8NCU4 936 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.94□□□□□ -1.46
TPM1-222ENST00000560131 MNS1Q8NEH6 495 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 TTC8Q8TAM2 541 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 SSH3Q8TE77 659 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 PPM1EQ8WY54 764 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 SMARCE1Q969G3 411 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 HOOK2Q96ED9 719 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 DDX11Q96FC9 970 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 SMAD5Q99717 465 aaKnown RBP5.94□□□□□ -1.46
TPM1-222ENST00000560131 YIPF4Q9BSR8 244 aa5.94□□□□□ -1.46
TPM1-222ENST00000560131 MRPL18Q9H0U6 180 aaKnown RBP5.94□□□□□ -1.46
TPM1-222ENST00000560131 CDH19Q9H159 772 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms