RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 C10orf76Q5T2E6 689 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 KCNV2Q8TDN2 545 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 CCT6BQ92526 530 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 HAS1Q92839 578 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 SPAG5Q96R06 1193 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 TACO1Q9BSH4 297 aaKnown RBP5.59□□□□□ -1.51
LRRC49-221ENST00000560107 BMP2KQ9NSY1 1161 aaPredicted RBP5.59□□□□□ -1.51
LRRC49-221ENST00000560107 AJAP1Q9UKB5 411 aaPredicted RBP5.59□□□□□ -1.51
LRRC49-221ENST00000560107 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 KIAA1024Q9UPX6 916 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 ZNF652Q9Y2D9 606 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 STXBP5LQ9Y2K9 1186 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 XIRP1Q702N8 1843 aaKnown RBP5.59□□□□□ -1.51
LRRC49-221ENST00000560107 ATAD5Q96QE3 1844 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 SNED1Q8TER0 1413 aa5.59□□□□□ -1.51
LRRC49-221ENST00000560107 ESYT2A0FGR8 921 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 CETN3O15182 167 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 SHBGP04278 402 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 PLA2G4BP0C869 781 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 NR2F2P24468 414 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 PON1P27169 355 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 CASP5P51878 434 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 GJB7Q6PEY0 223 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 DAAM2Q86T65 1068 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 GPBP1Q86WP2 473 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 CCDC65Q8IXS2 484 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 ANKRD13AQ8IZ07 590 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 RASGEF1CQ8N431 466 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 NEDD1Q8NHV4 660 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 CCDC26Q8TAB7 109 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 AKT1S1Q96B36 256 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 TLCD1Q96CP7 247 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 FAM212AQ96EL1 285 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 CHMP6Q96FZ7 201 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 XPO6Q96QU8 1125 aaKnown RBP5.59□□□□□ -1.52
LRRC49-221ENST00000560107 RIOX1Q9H6W3 641 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 VEZTQ9HBM0 779 aa5.59□□□□□ -1.52
LRRC49-221ENST00000560107 DDX25Q9UHL0 483 aaKnown RBP5.59□□□□□ -1.52
LRRC49-221ENST00000560107 NAV1Q8NEY1 1877 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 POTEB3A0JP26 581 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 FRMD3A2A2Y4 597 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 POTECB2RU33 542 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 PPIP5K2O43314 1243 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 KIF1CO43896 1103 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 MGRN1O60291 552 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 CTNND1O60716 968 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ECM2O94769 699 aaPredicted RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 TRIM37O94972 964 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 FGGP02679 453 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 H2AFZP0C0S5 128 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 CALRP27797 417 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 NT5C2P49902 561 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ELF3P78545 371 aaPredicted RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 POU5F1Q01860 360 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SEPT2Q15019 361 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ERMARDQ5T6L9 678 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 POTEBQ6S5H4 581 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 H2AFVQ71UI9 128 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ADAT2Q7Z6V5 191 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SLFN11Q7Z7L1 901 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 NT5DC3Q86UY8 548 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 CCDC50Q8IVM0 306 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 KIRREL3Q8IZU9 778 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ATP8B4Q8TF62 1192 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 U2AF1L4Q8WU68 220 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SEC14L1Q92503 715 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 MIEF2Q96C03 454 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 TBC1D31Q96DN5 1066 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 FAM129AQ9BZQ8 928 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SLITRK6Q9H5Y7 841 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 GPCPD1Q9NPB8 672 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 OSGEPQ9NPF4 335 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SUCLA2Q9P2R7 463 aaPredicted RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 PCDHA12Q9UN75 941 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 FRMD4BQ9Y2L6 1034 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 UTP11Q9Y3A2 253 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 TLDC2A0PJX2 215 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SMIM23A6NLE4 172 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 CCT8L1PA6NM43 557 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 DDX3XO00571 662 aaKnown RBP eCLIP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 PPFIA2O75334 1257 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 DNAJC8O75937 253 aaPredicted RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 FLOT1O75955 427 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ATP6V1G2O95670 118 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 BAG3O95817 575 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 AFPP02771 609 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 KRT18P05783 430 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 RPSAP08865 295 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 GHRP10912 638 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 EZRP15311 586 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 CHN1P15882 459 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 SMARCA1P28370 1054 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 HOXA7P31268 230 aaPredicted RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 PRPF4BQ13523 1007 aaKnown RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 PPP1R7Q15435 360 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 EXOC3L4Q17RC7 722 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 ARSHQ5FYA8 562 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 DCAF17Q5H9S7 520 aaPredicted RBP5.58□□□□□ -1.52
LRRC49-221ENST00000560107 TBC1D9BQ66K14 1250 aa5.58□□□□□ -1.52
LRRC49-221ENST00000560107 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms