RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ZNF302Q9NR11 478 aa10.49□□□□□ -0.73
HERC1-206ENST00000559996 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
HERC1-206ENST00000559996 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
HERC1-206ENST00000559996 MYH9P35579 1960 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 MYMKA6NI61 221 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 RARBP10826 455 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 CASP1P29466 404 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 SARSP49591 514 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 RARRES1P49788 294 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 PURAQ00577 322 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 LRRC41Q15345 812 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 ZRSR1Q15695 479 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 FSCN1Q16658 493 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 DGKDQ16760 1214 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 RINT1Q6NUQ1 792 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 CCDC73Q6ZRK6 1079 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 C1orf186Q6ZWK4 172 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 SPATA20Q8TB22 786 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 LARP4BQ92615 738 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 DNAJC19Q96DA6 116 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 CALML4Q96GE6 196 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 NACC1Q96RE7 527 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.48□□□□□ -0.73
HERC1-206ENST00000559996 CLSTN2Q9H4D0 955 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 SMARCAD1Q9H4L7 1026 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 USP25Q9UHP3 1055 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 DBR1Q9UK59 544 aaKnown RBP10.48□□□□□ -0.73
HERC1-206ENST00000559996 BRCA2P51587 3418 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 KDM3AQ9Y4C1 1321 aa10.48□□□□□ -0.73
HERC1-206ENST00000559996 NOP56O00567 594 aaKnown RBP10.47□□□□□ -0.73
HERC1-206ENST00000559996 BACH1O14867 736 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 KLRC4O43908 158 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 MBD3O95983 291 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 F2P00734 622 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 ZNF286BP0CG31 522 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 CCL5P13501 91 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 CYP11B2P19099 503 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 PTMSP20962 102 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
HERC1-206ENST00000559996 STAT6P42226 847 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 ADAM17P78536 824 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 PRKCEQ02156 737 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 DPYDQ12882 1025 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 CUL4BQ13620 913 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 KCNA10Q16322 511 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 SLC9C1Q4G0N8 1177 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 XKR3Q5GH77 459 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 MARCH8Q5T0T0 291 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 CNNM4Q6P4Q7 775 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 C7orf25Q9BPX7 421 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 BHMT2Q9H2M3 363 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 CUEDC2Q9H467 287 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 POLD4Q9HCU8 107 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 XPNPEP3Q9NQH7 507 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 ANKEF1Q9NU02 776 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 OGDHLQ9ULD0 1010 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 DNM3Q9UQ16 869 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 GRIN2DO15399 1336 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 FRMPD3Q5JV73 1810 aa10.47□□□□□ -0.73
HERC1-206ENST00000559996 SCN10AQ9Y5Y9 1956 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 IGKV6-21A0A0C4DH24 114 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 NPHP3-ACAD11A0A0J9YXS1 232 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 H3BRB1 525 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 MSCO60682 206 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 OATP04181 439 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 ASGR1P07306 291 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 C6orf222P0C671 652 aaPredicted RBP10.46□□□□□ -0.73
HERC1-206ENST00000559996 HOXC8P31273 242 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 TXLNAP40222 546 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 AFMP43652 599 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 CPT1AP50416 773 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 EHHADHQ08426 723 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 MAPK7Q13164 816 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 PNOCQ13519 176 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 GIT2Q14161 759 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 CAMK4Q16566 473 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 SKOR2Q2VWA4 1001 aaPredicted RBP10.46□□□□□ -0.73
HERC1-206ENST00000559996 GNASQ5JWF2 1037 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 VARS2Q5ST30 1063 aaKnown RBP10.46□□□□□ -0.73
HERC1-206ENST00000559996 NT5DC1Q5TFE4 455 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 PLA2G4FQ68DD2 849 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 TRMT1LQ7Z2T5 733 aaKnown RBP10.46□□□□□ -0.73
HERC1-206ENST00000559996 DAW1Q8N136 415 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 LINC01465Q8N7H1 131 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 CNNM3Q8NE01 707 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 ATP8B4Q8TF62 1192 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 PPP1R13LQ8WUF5 828 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
HERC1-206ENST00000559996 ATP6V0A1Q93050 837 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 RUSC1Q9BVN2 902 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 TRIM9Q9C026 710 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 MCOLN1Q9GZU1 580 aa10.46□□□□□ -0.73
HERC1-206ENST00000559996 TNMDQ9H2S6 317 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms