RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TNIP2Q8NFZ5 429 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 WDR48Q8TAF3 677 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 NACC1Q96RE7 527 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 PKN3Q6P5Z2 889 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 IYDQ6PHW0 289 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 ANKRD49Q8WVL7 239 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 HAUS5O94927 633 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 BBS9Q3SYG4 887 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 CNBD1Q8NA66 436 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 DTX3LQ8TDB6 740 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 SCN3BQ9NY72 215 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 NFIBO00712 420 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 HNRNPDLO14979 420 aaKnown RBP14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 TNNI3KQ59H18 835 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 CHMP1BQ7LBR1 199 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 TTC30AQ86WT1 665 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 ELMOD1Q8N336 334 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 PLEKHA8Q96JA3 519 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 FPGT-TNNI3KV9GXZ4 949 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 NCOA1Q15788 1441 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 PI4K2BG5E9Z4 385 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 TRIM13O60858 407 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 DDAH1O94760 285 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 CASP14P31944 242 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 OLFML2BQ68BL8 750 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 CCDC149Q6ZUS6 474 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 FBXO18Q8NFZ0 1043 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 AURKCQ9UQB9 309 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 PLAAQ9Y263 795 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 PRKCQQ04759 706 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 TBC1D9BQ66K14 1250 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 TMEM206Q9H813 350 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 GCNT4Q9P109 453 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 HSPA2P54652 639 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 PSMC6P62333 389 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 TCP10Q12799 353 aa14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 UTP6Q9NYH9 597 aaKnown RBP14.77□□□□□ -0.04
CSPG4P12-202ENST00000559989 ZMYM6O95789 1325 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 MAP3K13O43283 966 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 COBLO75128 1261 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 CPA1P15085 419 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 CXCR5P32302 372 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 RFWD2Q8NHY2 731 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 DHTKD1Q96HY7 919 aaPredicted RBP14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 FAM167BQ9BTA0 163 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 ITGA6P23229 1130 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 TRADDQ15628 312 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 CYGBQ8WWM9 190 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 XAGE2Q96GT9 111 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 FANCEQ9HB96 536 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 SPDYE5A6NIY4 337 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 TRIP13Q15645 432 aaPredicted RBP14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 SPDYE7PQ495Y7 208 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 SH3BP5LQ7L8J4 393 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 SAYSD1Q9NPB0 183 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 FANCLQ9NW38 375 aa14.77□□□□□ -0.05
CSPG4P12-202ENST00000559989 FAM107AO95990 144 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 ELF1P32519 619 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 FASTKD5Q7L8L6 764 aaKnown RBP14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 CLEC4FQ8N1N0 589 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 SH3KBP1Q96B97 665 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 ABCC5O15440 1437 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 CDC27P30260 824 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 GADL1Q6ZQY3 521 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 BBS7Q8IWZ6 715 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 EGFL8Q99944 293 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 SORBS3O60504 671 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 CLK1P49759 484 aaKnown RBP14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 HIC1Q14526 733 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 DDIASQ8IXT1 998 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 DIS3LQ8TF46 1054 aaKnown RBP14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 COG1Q8WTW3 980 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 KMT5AQ9NQR1 393 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 PLCH2O75038 1416 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 MROH5Q6ZUA9 1318 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 NDUFA5Q16718 116 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 ODR4Q5SWX8 454 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 PLA2G4DQ86XP0 818 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 FHDC1Q9C0D6 1143 aaPredicted RBP14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 CCDC195A0A1B0GUA6 201 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 EMBQ6PCB8 327 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 TGFBRAP1Q8WUH2 860 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 GRAMD1AQ96CP6 724 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 PCDHA13Q9Y5I0 950 aa14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 EIF2AK4Q9P2K8 1649 aaKnown RBP14.76□□□□□ -0.05
CSPG4P12-202ENST00000559989 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 SUPT3HB4E1H0 165 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 M0R3G1 203 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 SLC7A5Q01650 507 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 CUL3Q13618 768 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 FBXO11Q86XK2 927 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms