RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MYCLP12524 364 aaPredicted RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 ALAS2P22557 587 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ADORA2AP29274 412 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 SREBF1P36956 1147 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ALDH5A1P51649 535 aaPredicted RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 MRPL12P52815 198 aaKnown RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 SNRPNP63162 240 aaKnown RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 KRT85P78386 507 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 MRPS9P82933 396 aaKnown RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 PGM5Q15124 567 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 IL17AQ16552 155 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 CCL14Q16627 93 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 TKFCQ3LXA3 575 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 SPECC1Q5M775 1068 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 TMEM63BQ5T3F8 832 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ZNF468Q5VIY5 522 aaPredicted RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 ARHGEF16Q5VV41 709 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ANO1Q5XXA6 986 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 C1orf229Q6ZS94 237 aaPredicted RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 EEPD1Q7L9B9 569 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 BRAPQ7Z569 592 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 NEK8Q86SG6 692 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ALYREFQ86V81 257 aaKnown RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 CHST13Q8NET6 341 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 CD99L2Q8TCZ2 262 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 BICD2Q8TD16 824 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 LEO1Q8WVC0 666 aaPredicted RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 LENG9Q96B70 501 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 BTBD6Q96KE9 485 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 CEP63Q96MT8 703 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 PHACTR1Q9C0D0 580 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 GOLPH3LQ9H4A5 285 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ZSCAN16Q9H4T2 348 aaPredicted RBP5.92□□□□□ -1.46
SPG11-220ENST00000559933 BCAS3Q9H6U6 928 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ZFYVE28Q9HCC9 887 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 PXMP2Q9NR77 195 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 FLRT1Q9NZU1 646 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 GABRQQ9UN88 632 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 TELO2Q9Y4R8 837 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 FRMPD4Q14CM0 1322 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 ZNF236Q9UL36 1845 aa5.92□□□□□ -1.46
SPG11-220ENST00000559933 DOCK3Q8IZD9 2030 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 PP2D1A8MPX8 630 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 DDX39AO00148 427 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 PRPF40AO75400 957 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 SLC25A27O95847 323 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 ARP10275 920 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 ITGB5P18084 799 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 MCM4P33991 863 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 GCLCP48506 637 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 NASPP49321 788 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 PCBP4P57723 403 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 GHRHRQ02643 423 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 AP3B2Q13367 1082 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 STK38Q15208 465 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 NFKBIBQ15653 356 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 PRR16Q569H4 304 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 RILPL1Q5EBL4 403 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 SH3PXD2AQ5TCZ1 1133 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 GALNT17Q6IS24 598 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 USP49Q70CQ1 688 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 PLEKHH3Q7Z736 793 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 MCF2L2Q86YR7 1114 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 FBXO16Q8IX29 292 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 C4orf32Q8N8J7 132 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 FAM133AQ8N9E0 248 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 LINC00301Q8NCQ3 95 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 GTF3C2Q8WUA4 911 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 SCG3Q8WXD2 468 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 CRYGNQ8WXF5 182 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 LENG1Q96BZ8 264 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 ZNF396Q96N95 335 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 RMDN3Q96TC7 470 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 PDCD2LQ9BRP1 358 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 WDR11Q9BZH6 1224 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 NOP53Q9NZM5 478 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 FBXO2Q9UK22 296 aaPredicted RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 NOL7Q9UMY1 257 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 PFASO15067 1338 aa5.91□□□□□ -1.46
SPG11-220ENST00000559933 ZNFX1Q9P2E3 1918 aaKnown RBP5.91□□□□□ -1.46
SPG11-220ENST00000559933 BRCA2P51587 3418 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 DNAJC25-GNG10A0A024R161 153 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 IGLV3-22A0A075B6J6 115 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 VWA3AA6NCI4 1184 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 GNB5O14775 395 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 SPTLC2O15270 562 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 MSH4O15457 936 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 EFSO43281 561 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 NEMFO60524 1076 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 ARIH2O95376 493 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 OR52Z1P0C646 297 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 FCER1AP12319 257 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 CYP2B6P20813 491 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 CDC25AP30304 524 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 PSMC4P43686 418 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 ME1P48163 572 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 INHBEP58166 350 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 CCNA1P78396 465 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms