RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 PDCD2LQ9BRP1 358 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 NUP58Q9BVL2 599 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 TUFT1Q9NNX1 390 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 DIS3Q9Y2L1 958 aaKnown RBP19.68■□□□□ 0.74
SNX1-208ENST00000559844 TRIM17Q9Y577 477 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 KIAA1217Q5T5P2 1943 aa19.67■□□□□ 0.74
SNX1-208ENST00000559844 FRMD3A2A2Y4 597 aa19.67■□□□□ 0.74
SNX1-208ENST00000559844 MUTP22033 750 aa19.67■□□□□ 0.74
SNX1-208ENST00000559844 TMTC1Q8IUR5 882 aa19.67■□□□□ 0.74
SNX1-208ENST00000559844 RETREG2Q8NC44 543 aa19.67■□□□□ 0.74
SNX1-208ENST00000559844 EIF2AK1Q9BQI3 630 aaKnown RBP19.67■□□□□ 0.74
SNX1-208ENST00000559844 NOC4LQ9BVI4 516 aaKnown RBP19.67■□□□□ 0.74
SNX1-208ENST00000559844 WDR11Q9BZH6 1224 aa19.67■□□□□ 0.74
SNX1-208ENST00000559844 PSMD10O75832 226 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 MYCLP12524 364 aaPredicted RBP19.66■□□□□ 0.74
SNX1-208ENST00000559844 FKBP15Q5T1M5 1219 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 OTOP1Q7RTM1 612 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 IQCDQ96DY2 449 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 MPHOSPH6Q99547 160 aaKnown RBP19.66■□□□□ 0.74
SNX1-208ENST00000559844 ABHD10Q9NUJ1 306 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 B4DLN1 442 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 NR3C2P08235 984 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 CCDC175P0C221 793 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 ETF1P62495 437 aaKnown RBP19.66■□□□□ 0.74
SNX1-208ENST00000559844 CCL14Q16627 93 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 HERC4Q5GLZ8 1057 aaPredicted RBP19.66■□□□□ 0.74
SNX1-208ENST00000559844 ZNF467Q7Z7K2 595 aaPredicted RBP19.66■□□□□ 0.74
SNX1-208ENST00000559844 ZFP91Q96JP5 570 aaPredicted RBP19.66■□□□□ 0.74
SNX1-208ENST00000559844 IWS1Q96ST2 819 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 PHLPP2Q6ZVD8 1323 aa19.66■□□□□ 0.74
SNX1-208ENST00000559844 ASB14A6NK59 587 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 MEIS1O00470 390 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 GAS7O60861 476 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 EYA4O95677 639 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 XRCC5P13010 732 aaKnown RBP19.65■□□□□ 0.74
SNX1-208ENST00000559844 TBC1D8BQ0IIM8 1120 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 PCNX4Q63HM2 1172 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 TOGARAM2Q6ZUX3 1019 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 NIPA1Q7RTP0 329 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 MXRA8Q9BRK3 442 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 FLRT1Q9NZU1 646 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 PCDHA2Q9Y5H9 948 aa19.65■□□□□ 0.74
SNX1-208ENST00000559844 CCND2P30279 289 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 KRT9P35527 623 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 LRRC41Q15345 812 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 ARSHQ5FYA8 562 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 CYP26C1Q6V0L0 522 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 ARMCX2Q7L311 632 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 RAET1EQ8TD07 263 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 ZNF577Q9BSK1 485 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 TEKT3Q9BXF9 490 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 CAPN11Q9UMQ6 739 aa19.64■□□□□ 0.74
SNX1-208ENST00000559844 SOWAHDA6NJG2 315 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 EML1O00423 815 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 EDNRBP24530 442 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 GIT2Q14161 759 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 MAN2A1Q16706 1144 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 MIIPQ5JXC2 388 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 SYT10Q6XYQ8 523 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 ERGIC2Q96RQ1 377 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 RIT2Q99578 217 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 HSD17B14Q9BPX1 270 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 TINF2Q9BSI4 451 aa19.64■□□□□ 0.73
SNX1-208ENST00000559844 LUC7L2Q9Y383 392 aaKnown RBP19.64■□□□□ 0.73
SNX1-208ENST00000559844 LOC102724159A0A0B4J2E5 919 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 NPHP3-ACAD11A0A0J9YXS1 232 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 CTIFO43310 598 aaKnown RBP19.63■□□□□ 0.73
SNX1-208ENST00000559844 PRMT2P55345 433 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 PSMC6P62333 389 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 MRPS9P82933 396 aaKnown RBP19.63■□□□□ 0.73
SNX1-208ENST00000559844 FKBP3Q00688 224 aaKnown RBP19.63■□□□□ 0.73
SNX1-208ENST00000559844 IRF5Q13568 498 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 PWP2Q15269 919 aaKnown RBP19.63■□□□□ 0.73
SNX1-208ENST00000559844 STXBP2Q15833 593 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 TSR1Q2NL82 804 aaKnown RBP19.63■□□□□ 0.73
SNX1-208ENST00000559844 VWA3BQ502W6 1294 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 ZCWPW2Q504Y3 356 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 OLFML2BQ68BL8 750 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 MAMDC4Q6UXC1 1216 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 VSIG10LQ86VR7 867 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 OR8K1Q8NGG5 319 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 TRIB2Q92519 343 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 CEP63Q96MT8 703 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 HTTP42858 3142 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 GNA14O95837 355 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 CYP4A11Q02928 519 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 EPHA7Q15375 998 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 FIGNQ5HY92 759 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 RAD9BQ6WBX8 426 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 LRRC55Q6ZSA7 311 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 EEPD1Q7L9B9 569 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 NEK9Q8TD19 979 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 MORC4Q8TE76 937 aa19.63■□□□□ 0.73
SNX1-208ENST00000559844 ELNP15502 786 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 SYCP1Q15431 976 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 XRRA1Q6P2D8 792 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 MSL3Q8N5Y2 521 aaKnown RBP19.62■□□□□ 0.73
SNX1-208ENST00000559844 DNAJC7Q99615 494 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms