RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 DDX11L8A8MPP1 907 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 MED24O75448 989 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 CXCL10P02778 98 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 SPATA31C1P0DKV0 1188 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 RFC2P35250 354 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 ATP2C1P98194 919 aaPredicted RBP21.87■■□□□ 1.09
SHF-205ENST00000559566 TMEM62Q0P6H9 643 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 RASIP1Q5U651 963 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 OTOP2Q7RTS6 562 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 C4orf19Q8IY42 314 aa21.87■■□□□ 1.09
SHF-205ENST00000559566 TNPO1Q92973 898 aaKnown RBP21.87■■□□□ 1.09
SHF-205ENST00000559566 CXXC1Q9P0U4 656 aaPredicted RBP21.87■■□□□ 1.09
SHF-205ENST00000559566 PP2D1A8MPX8 630 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 CAND2O75155 1236 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 HSP90AA1P07900 732 aaKnown RBP21.86■■□□□ 1.09
SHF-205ENST00000559566 FXR2P51116 673 aaKnown RBP eCLIP21.86■■□□□ 1.09
SHF-205ENST00000559566 CLCN3P51790 818 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 DRP2Q13474 957 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 FOXD4L5Q5VV16 416 aaPredicted RBP21.86■■□□□ 1.09
SHF-205ENST00000559566 PSRC1Q6PGN9 363 aaPredicted RBP21.86■■□□□ 1.09
SHF-205ENST00000559566 TPH2Q8IWU9 490 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 LRRC71Q8N4P6 559 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 FOXD4L4Q8WXT5 416 aaPredicted RBP21.86■■□□□ 1.09
SHF-205ENST00000559566 RNPC3Q96LT9 517 aaKnown RBP21.86■■□□□ 1.09
SHF-205ENST00000559566 CDY2AQ9Y6F7 541 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 WDR81Q562E7 1941 aa21.86■■□□□ 1.09
SHF-205ENST00000559566 FGBP02675 491 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 MRPS6P82932 125 aaKnown RBP21.85■■□□□ 1.09
SHF-205ENST00000559566 MKRN4PQ13434 485 aaPredicted RBP21.85■■□□□ 1.09
SHF-205ENST00000559566 ECM1Q16610 540 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 FAM109BQ6ICB4 259 aaPredicted RBP21.85■■□□□ 1.09
SHF-205ENST00000559566 CATSPER3Q86XQ3 398 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 RPUSD2Q8IZ73 545 aaKnown RBP21.85■■□□□ 1.09
SHF-205ENST00000559566 HERVK_113Q902F9 699 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 PPP1R16BQ96T49 567 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 ZSWIM4Q9H7M6 989 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 CDHR5Q9HBB8 845 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 CEP131Q9UPN4 1083 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 CLIC4Q9Y696 253 aa21.85■■□□□ 1.09
SHF-205ENST00000559566 LYPLA2O95372 231 aa21.84■■□□□ 1.09
SHF-205ENST00000559566 YWHABP31946 246 aaKnown RBP21.84■■□□□ 1.09
SHF-205ENST00000559566 PRPHP41219 470 aa21.84■■□□□ 1.09
SHF-205ENST00000559566 SF3A1Q15459 793 aaKnown RBP21.84■■□□□ 1.09
SHF-205ENST00000559566 METTL13Q8N6R0 699 aa21.84■■□□□ 1.09
SHF-205ENST00000559566 IGSF22Q8N9C0 903 aa21.84■■□□□ 1.09
SHF-205ENST00000559566 SIP14410 1827 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 VTNP04004 478 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 GHRP10912 638 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 CDC25AP30304 524 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 GRIN1Q05586 938 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 LPIN1Q14693 890 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 PTPAQ15257 358 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 EFCAB12Q6NXP0 572 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 NEK9Q8TD19 979 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 PIGOQ8TEQ8 1089 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 CYP26B1Q9NR63 512 aa21.83■■□□□ 1.09
SHF-205ENST00000559566 MYH9P35579 1960 aaKnown RBP21.82■■□□□ 1.08
SHF-205ENST00000559566 IGKV6-21A0A0C4DH24 114 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 LAD1O00515 517 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 MAGEB2O15479 319 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 PFKMP08237 780 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 TBC1D8BQ0IIM8 1120 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 TMEM266Q2M3C6 531 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 LRIT3Q3SXY7 679 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 POTEGQ6S5H5 508 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 DBF4BQ8NFT6 615 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 LRCH3Q96II8 777 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 ZNF668Q96K58 619 aaPredicted RBP21.82■■□□□ 1.08
SHF-205ENST00000559566 CEP170P1Q96L14 293 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 MMTAG2Q9BU76 263 aaKnown RBP21.82■■□□□ 1.08
SHF-205ENST00000559566 POLR3CQ9BUI4 534 aaPredicted RBP21.82■■□□□ 1.08
SHF-205ENST00000559566 AGO3Q9H9G7 860 aaKnown RBP21.82■■□□□ 1.08
SHF-205ENST00000559566 SUGCTQ9HAC7 445 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 TUFT1Q9NNX1 390 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 BMP2KQ9NSY1 1161 aaPredicted RBP21.82■■□□□ 1.08
SHF-205ENST00000559566 LRWD1Q9UFC0 647 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 TRPV2Q9Y5S1 764 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 LAMA3Q16787 3333 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 TET1Q8NFU7 2136 aa21.82■■□□□ 1.08
SHF-205ENST00000559566 GRXCR1A8MXD5 290 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 DKC1O60832 514 aaKnown RBP eCLIP21.81■■□□□ 1.08
SHF-205ENST00000559566 MAFO75444 373 aaPredicted RBP21.81■■□□□ 1.08
SHF-205ENST00000559566 PARNO95453 639 aaKnown RBP21.81■■□□□ 1.08
SHF-205ENST00000559566 FXR1P51114 621 aaKnown RBP eCLIP21.81■■□□□ 1.08
SHF-205ENST00000559566 PLEKHG4Q58EX7 1191 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 FBXO47Q5MNV8 452 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 DTHD1Q6ZMT9 781 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 RSPH3Q86UC2 560 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 TMEM40Q8WWA1 233 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 USP28Q96RU2 1077 aa21.81■■□□□ 1.08
SHF-205ENST00000559566 CELF4Q9BZC1 486 aaKnown RBP21.81■■□□□ 1.08
SHF-205ENST00000559566 TRIOBPQ9H2D6 2365 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 VWA3AA6NCI4 1184 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 GPR32O75388 356 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 ZSCAN22P10073 491 aaPredicted RBP21.8■■□□□ 1.08
SHF-205ENST00000559566 RPA1P27694 616 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 PDIA5Q14554 519 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 KIZQ2M2Z5 673 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 XKR9Q5GH70 373 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 CNKSR3Q6P9H4 555 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms