RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SLC16A1P53985 500 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 CORO7P57737 925 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 KRT85P78386 507 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 GRIN1Q05586 938 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 GBX1Q14549 363 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 LLGL1Q15334 1064 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 EPHA7Q15375 998 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 CPSF6Q16630 551 aaKnown RBP eCLIP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 FSCN1Q16658 493 aaKnown RBP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 CCDC157Q569K6 752 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PRAMEF9Q5VWM5 478 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 GALNT18Q6P9A2 607 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 SLCO6A1Q86UG4 719 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 DCP2Q8IU60 420 aaKnown RBP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 RIOX2Q8IUF8 465 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PHYKPLQ8IUZ5 450 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 TRIM48Q8IWZ4 208 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ZBTB34Q8NCN2 500 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ACRBPQ8NEB7 543 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 SH3RF2Q8TEC5 729 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PARD3BQ8TEW8 1205 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 DLG3Q92796 817 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 IL17RAQ96F46 866 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ELAC2Q9BQ52 826 aaKnown RBP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 SSBP4Q9BWG4 385 aaPredicted RBP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ZNF700Q9H0M5 742 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ADAMTS10Q9H324 1103 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 SMOC1Q9H4F8 434 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PPCSQ9HAB8 311 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PDLIM7Q9NR12 457 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PIM2Q9P1W9 311 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 MYOTQ9UBF9 498 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ZC3H7BQ9UGR2 993 aaKnown RBP2.89□□□□□ -1.95
GABPB1-209ENST00000559100 PCDHB4Q9Y5E5 795 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 SNX11Q9Y5W9 270 aa2.89□□□□□ -1.95
GABPB1-209ENST00000559100 ANO9A1A5B4 782 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 FADS2P1A8MWK0 482 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 IFRD1O00458 451 aaPredicted RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 PMM2O15305 246 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SH3BP5O60239 455 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 PQBP1O60828 265 aaKnown RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 ZRANB2O95218 330 aaKnown RBP eCLIP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 MMEP08473 750 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 PHKG2P15735 406 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 C5AR1P21730 350 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SSTR4P31391 388 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CD96P40200 585 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 ARL4AP40617 200 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 KIR2DL1P43626 348 aaPredicted RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 KIR2DL2P43627 348 aaPredicted RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 FNTBP49356 437 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 ADKP55263 362 aaKnown RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CCT2P78371 535 aaKnown RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CYP4F8P98187 520 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CDK17Q00537 523 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 PRKCQQ04759 706 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CHRNEQ04844 493 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 ZP2Q05996 745 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SEC23AQ15436 765 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 LONRF1Q17RB8 773 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 GRAMD1BQ3KR37 738 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 HSF5Q4G112 596 aaPredicted RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 RALGPS1Q5JS13 557 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 HABP4Q5JVS0 413 aaKnown RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 TTC38Q5R3I4 469 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CATSPEREQ5SY80 951 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 MBNL2Q5VZF2 373 aaKnown RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CYP4F22Q6NT55 531 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 C1orf228Q6PIY5 440 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 APBB1IPQ7Z5R6 666 aaPredicted RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 MILR1Q7Z6M3 343 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 MORC1Q86VD1 984 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SPPL2CQ8IUH8 684 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 Q8N1Y9 231 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 OXR1Q8N573 874 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 WDR48Q8TAF3 677 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SLC35G2Q8TBE7 412 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SSH1Q8WYL5 1049 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 E2F7Q96AV8 911 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 RUNDC1Q96C34 613 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 RAX2Q96IS3 184 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 GBP4Q96PP9 640 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 TAAR9Q96RI9 348 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 MTA3Q9BTC8 594 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 MYL10Q9BUA6 226 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 SEMA4AQ9H3S1 761 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 RXFP1Q9HBX9 757 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 USP36Q9P275 1121 aaKnown RBP2.88□□□□□ -1.95
GABPB1-209ENST00000559100 ARHGAP28Q9P2N2 729 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 FBLN5Q9UBX5 448 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 TAGLN3Q9UI15 199 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 TMEM59LQ9UK28 342 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 NUDT5Q9UKK9 219 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 DNM3Q9UQ16 869 aa2.88□□□□□ -1.95
GABPB1-209ENST00000559100 CCDC189A1A4V9 331 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PRAMEF22A3QJZ6 481 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 DBX1A6NMT0 343 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 FAM90A27PA6NNH2 459 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms