RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LAD1O00515 517 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 CHRNA1P02708 482 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
SNX1-204ENST00000559061 RAG1P15918 1043 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 KLRC1P26715 233 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 ZNF484Q5JVG2 852 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 FAM26DQ5JW98 314 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 C9orf50Q5SZB4 431 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 KCNK18Q7Z418 384 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 RPAINQ86UA6 219 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 KIAA0319LQ8IZA0 1049 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 DNAJB3Q8WWF6 145 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 ZSCAN16Q9H4T2 348 aaPredicted RBP12.83□□□□□ -0.36
SNX1-204ENST00000559061 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
SNX1-204ENST00000559061 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
SNX1-204ENST00000559061 MORC2Q9Y6X9 1032 aaPredicted RBP12.83□□□□□ -0.36
SNX1-204ENST00000559061 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.36
SNX1-204ENST00000559061 RRN3P2A6NIE6 340 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 MARCH6O60337 910 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 CTSHP09668 335 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 ACRP10323 421 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 SELPP16109 830 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
SNX1-204ENST00000559061 BMP8BP34820 402 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 CLCN3P51790 818 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 MTERF2Q49AM1 385 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
SNX1-204ENST00000559061 USP49Q70CQ1 688 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 LRRC8DQ7L1W4 858 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 TPH2Q8IWU9 490 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 LRRC71Q8N4P6 559 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 NEK9Q8TD19 979 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 FAM167AQ96KS9 214 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
SNX1-204ENST00000559061 CDHR5Q9HBB8 845 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 XPNPEP1Q9NQW7 623 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 GBF1Q92538 1859 aa12.82□□□□□ -0.36
SNX1-204ENST00000559061 COL4A6Q14031 1691 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 SMIM35A0A1B0GVV1 85 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 CXCL10P02778 98 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 RPA1P27694 616 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 THPOP40225 353 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 RARRES1P49788 294 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 CEBPZQ03701 1054 aaKnown RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 TMEM62Q0P6H9 643 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 GRB10Q13322 594 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 BECN1Q14457 450 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 PDIA5Q14554 519 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 FOXD4L6Q3SYB3 417 aaPredicted RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 TMEM240Q5SV17 173 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 RASIP1Q5U651 963 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 FOXD4L3Q6VB84 417 aaPredicted RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 LINC00301Q8NCQ3 95 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 PIGOQ8TEQ8 1089 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 TMEM40Q8WWA1 233 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 CLIC6Q96NY7 704 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 FAM49AQ9H0Q0 323 aaPredicted RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 TUFT1Q9NNX1 390 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 CYP26B1Q9NR63 512 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 TFIP11Q9UBB9 837 aaKnown RBP12.81□□□□□ -0.36
SNX1-204ENST00000559061 NOD1Q9Y239 953 aa12.81□□□□□ -0.36
SNX1-204ENST00000559061 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 GPR32O75388 356 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 GNAT1P11488 350 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 DNM1Q05193 864 aaKnown RBP12.8□□□□□ -0.36
SNX1-204ENST00000559061 FPGSQ05932 587 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 BFSP2Q13515 415 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 SLC39A14Q15043 492 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 SHHQ15465 462 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 HYIQ5T013 277 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 TAF2Q6P1X5 1199 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 DTHD1Q6ZMT9 781 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.8□□□□□ -0.362e-9■■□□□ 12.4
SNX1-204ENST00000559061 IL23AQ9NPF7 189 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 PRKAG2Q9UGJ0 569 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 CDY2AQ9Y6F7 541 aa12.8□□□□□ -0.36
SNX1-204ENST00000559061 A0A087X0B3 334 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 CAND2O75155 1236 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 MAFO75444 373 aaPredicted RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 VTNP04004 478 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 MRPS6P82932 125 aaKnown RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 LPIN1Q14693 890 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 SPECC1Q5M775 1068 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 EFCAB12Q6NXP0 572 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms