RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 NPHS1O60500 1241 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 ITGAVP06756 1048 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 MAPKAPK2P49137 400 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 EIF4A1P60842 406 aaKnown RBP6.44□□□□□ -1.38
CASC4-207ENST00000559037 SCRN1Q12765 414 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 RAB3GAP1Q15042 981 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 SLC10A6Q3KNW5 377 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 ACBD5Q5T8D3 534 aaPredicted RBP6.44□□□□□ -1.38
CASC4-207ENST00000559037 TBC1D9BQ66K14 1250 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 PAQR3Q6TCH7 311 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 MICAL1Q8TDZ2 1067 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 SIRT5Q9NXA8 310 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 MYBBP1AQ9BQG0 1328 aaKnown RBP6.44□□□□□ -1.38
CASC4-207ENST00000559037 ADCY9O60503 1353 aa6.44□□□□□ -1.38
CASC4-207ENST00000559037 TAF1P21675 1872 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 COL11A2P13942 1736 aaPredicted RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 MYOCOSA0A1B0GUC4 107 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 CAMTA2O94983 1202 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 CHRNA5P30532 468 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 TMPOP42166 694 aaKnown RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 KCNAB2Q13303 367 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 TESK1Q15569 626 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 DALRD3Q5D0E6 543 aaKnown RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 SOGA3Q5TF21 947 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 CLEC4GQ6UXB4 293 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 CELF2-AS1Q8N7Q2 184 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 PNISRQ8TF01 805 aaKnown RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 THUMPD2Q9BTF0 503 aaKnown RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 PRKRIP1Q9H875 184 aaPredicted RBP6.43□□□□□ -1.38
CASC4-207ENST00000559037 CD320Q9NPF0 282 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.43□□□□□ -1.38
CASC4-207ENST00000559037 NUDT5Q9UKK9 219 aa6.43□□□□□ -1.38
CASC4-207ENST00000559037 ANKRD36CQ5JPF3 1778 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 ETV2O00321 342 aaPredicted RBP6.42□□□□□ -1.38
CASC4-207ENST00000559037 KRT1P04264 644 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 THBDP07204 575 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 DBHP09172 617 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 PIP4K2AP48426 406 aaPredicted RBP6.42□□□□□ -1.38
CASC4-207ENST00000559037 GALK1P51570 392 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 GTF2A2P52657 109 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 RIPK4P57078 832 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 C1QTNF8P60827 252 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 DLG4P78352 724 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 BICRALQ6AI39 1079 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 ZC3H14Q6PJT7 736 aaKnown RBP6.42□□□□□ -1.38
CASC4-207ENST00000559037 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 LZTR1Q8N653 840 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 NETO2Q8NC67 525 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 NPLOC4Q8TAT6 608 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 ZSCAN18Q8TBC5 510 aaPredicted RBP6.42□□□□□ -1.38
CASC4-207ENST00000559037 BTN2A2Q8WVV5 523 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 BRIP1Q9BX63 1249 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 BABAM1Q9NWV8 329 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 KLHL14Q9P2G3 628 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 POLR2AP24928 1970 aaKnown RBP6.42□□□□□ -1.38
CASC4-207ENST00000559037 ATP10DQ9P241 1426 aa6.42□□□□□ -1.38
CASC4-207ENST00000559037 ARID1BQ8NFD5 2236 aaPredicted RBP6.41□□□□□ -1.38
CASC4-207ENST00000559037 H0YIN7 160 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 SNRPB2P08579 225 aaKnown RBP6.41□□□□□ -1.38
CASC4-207ENST00000559037 C1QTNF9P0C862 333 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 PLS3P13797 630 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 VIPR1P32241 457 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 ZNF124Q15973 351 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 KCNA10Q16322 511 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 PRR5LQ6MZQ0 368 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 RPTNQ6XPR3 784 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 LRRC47Q8N1G4 583 aaKnown RBP6.41□□□□□ -1.38
CASC4-207ENST00000559037 CLEC1BQ9P126 229 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 SIRPGQ9P1W8 387 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 MBD1Q9UIS9 605 aaPredicted RBP6.41□□□□□ -1.38
CASC4-207ENST00000559037 MSRB2Q9Y3D2 182 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 MAPK8IP3Q9UPT6 1336 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 CARMIL3Q8ND23 1372 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 LAMB2P55268 1798 aa6.41□□□□□ -1.38
CASC4-207ENST00000559037 KLRG2A4D1S0 409 aaPredicted RBP6.4□□□□□ -1.38
CASC4-207ENST00000559037 C7orf72A4D263 438 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 NUDT19A8MXV4 375 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 ERVV-1B6SEH8 477 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 RFXAPO00287 272 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 CHL1O00533 1208 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 N4BP3O15049 544 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 MYO1BO43795 1136 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 CAPNS1P04632 268 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 MSL3P1P0C860 447 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 GLI4P10075 376 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 GFRA1P56159 465 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 JAG1P78504 1218 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 MAP4K2Q12851 820 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 HSP90AA2PQ14568 343 aaPredicted RBP6.4□□□□□ -1.38
CASC4-207ENST00000559037 KIR3DS1Q14943 382 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 HLFQ16534 295 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 PLEKHN1Q494U1 663 aaPredicted RBP6.4□□□□□ -1.38
CASC4-207ENST00000559037 LRP10Q7Z4F1 713 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 NPM2Q86SE8 214 aaKnown RBP6.4□□□□□ -1.38
CASC4-207ENST00000559037 C2CD5Q86YS7 1000 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 CCDC146Q8IYE0 955 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 TTLL6Q8N841 843 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 FRS2Q8WU20 508 aa6.4□□□□□ -1.38
CASC4-207ENST00000559037 KCTD13Q8WZ19 329 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms