RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 MIER3Q7Z3K6 550 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 DEFB123Q8N688 67 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 FAM161BQ96MY7 647 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 TRANK1O15050 2925 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 ATG2AQ2TAZ0 1938 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 EPOPA6NHQ4 379 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 POTEMA6NI47 508 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 RRN3P2A6NIE6 340 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 PFKMP08237 780 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 GHRP10912 638 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 DNAJB2P25686 324 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 SFNP31947 248 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 MCM7P33993 719 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 CLCN3P51790 818 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 CTTNQ14247 550 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 CNKSR3Q6P9H4 555 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 LRRC71Q8N4P6 559 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 DYDC2Q96IM9 177 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 ZNF668Q96K58 619 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 PPP1R16BQ96T49 567 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 ADAMTS10Q9H324 1103 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 UNC80Q8N2C7 3258 aa14.24□□□□□ -0.13
RABGGTA-207ENST00000558936 COL1A2P08123 1366 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 XIRP2A4UGR9 3374 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 MGEA5O60502 916 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 CAND2O75155 1236 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 VTNP04004 478 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 LINC00271P0C7V0 271 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 GNAT1P11488 350 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 JAK3P52333 1124 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 MRPS6P82932 125 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 GRIN2CQ14957 1233 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 EPHA7Q15375 998 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 ZNF484Q5JVG2 852 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 FAM160B1Q5W0V3 765 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 TAF2Q6P1X5 1199 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 RDM1Q8NG50 284 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 FTOQ9C0B1 505 aaKnown RBP eCLIP14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 TTC12Q9H892 705 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 UPF2Q9HAU5 1272 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
RABGGTA-207ENST00000558936 KDM3AQ9Y4C1 1321 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 NEMFO60524 1076 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 MED24O75448 989 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 CD52P31358 61 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 TXKP42681 527 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 MCM2P49736 904 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 CYP4A11Q02928 519 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 CALCRLQ16602 461 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 TMEM266Q2M3C6 531 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 TTC38Q5R3I4 469 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 NCAPH2Q6IBW4 605 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 LRRC15Q8TF66 581 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 EIF2AK1Q9BQI3 630 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 CELF4Q9BZC1 486 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 NKX2-4Q9H2Z4 354 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 NOC2LQ9Y3T9 749 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 SLC4A7Q9Y6M7 1214 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 KIAA1671Q9BY89 1806 aa14.22□□□□□ -0.13
RABGGTA-207ENST00000558936 ENPP3O14638 875 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 CSDE1O75534 798 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 PARNO95453 639 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 ATP2A2P16615 1042 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 PSMC5P62195 406 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 GRIN1Q05586 938 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 TRIM29Q14134 588 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 ADGRE1Q14246 886 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 MTERF2Q49AM1 385 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 EFCAB12Q6NXP0 572 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 FAM173BQ6P4H8 233 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 KSR1Q8IVT5 923 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 HERC6Q8IVU3 1022 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 SNX21Q969T3 373 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 LXNQ9BS40 222 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 MMTAG2Q9BU76 263 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 MTIF3Q9H2K0 278 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 RC3H2Q9HBD1 1191 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 ERVK-5Q9HDB9 667 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 PCDHA12Q9UN75 941 aa14.21□□□□□ -0.13
RABGGTA-207ENST00000558936 MYH15Q9Y2K3 1946 aa14.21□□□□□ -0.14
RABGGTA-207ENST00000558936 FNDC1Q4ZHG4 1894 aaPredicted RBP14.21□□□□□ -0.14
RABGGTA-207ENST00000558936 VCANP13611 3396 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 PP2D1A8MPX8 630 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 ZBBXA8MT70 800 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 RFXAPO00287 272 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 MAFO75444 373 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 BAIAP3O94812 1187 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 P4HBP07237 508 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 ACTN1P12814 892 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 TECP42680 631 aa14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 QARSP47897 775 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-207ENST00000558936 KIZQ2M2Z5 673 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms