RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 KANK2Q63ZY3 851 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 CNNM4Q6P4Q7 775 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 GIMAP6Q6P9H5 292 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 LRSAM1Q6UWE0 723 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 RTN4RL1Q86UN2 441 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-207ENST00000558919 PPM1KQ8N3J5 372 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 KIAA1958Q8N8K9 716 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 FOXB1Q99853 325 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 CARD11Q9BXL7 1154 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 PCIF1Q9H4Z3 704 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 B8ZZF3 427 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 LAMTOR5O43504 91 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 B4GALT4O60513 344 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 KPNA6O60684 536 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 CELA3BP08861 270 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 HSD3B2P26439 372 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 ETV4P43268 484 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 PPP2CBP62714 309 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 PPP2CAP67775 309 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 DSG1Q02413 1049 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 USP10Q14694 798 aaKnown RBP5.36□□□□□ -1.55
VPS13C-207ENST00000558919 TBC1D10BQ4KMP7 808 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-207ENST00000558919 CREB3L3Q68CJ9 461 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 ARHGEF18Q6ZSZ5 1173 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 RALYLQ86SE5 291 aaKnown RBP5.36□□□□□ -1.55
VPS13C-207ENST00000558919 NME9Q86XW9 330 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 IFNL2Q8IZJ0 200 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 BDH2Q9BUT1 245 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 ZDHHC5Q9C0B5 715 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 SPO11Q9Y5K1 396 aa5.36□□□□□ -1.55
VPS13C-207ENST00000558919 GAS7O60861 476 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 ITGB3P05106 788 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 APEX1P27695 318 aaKnown RBP5.35□□□□□ -1.55
VPS13C-207ENST00000558919 EPHB4P54760 987 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 CD83Q01151 205 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 PLP2Q04941 152 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 EIF4HQ15056 248 aaKnown RBP5.35□□□□□ -1.55
VPS13C-207ENST00000558919 PCBP1Q15365 356 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS13C-207ENST00000558919 EPHA7Q15375 998 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 TMEM200BQ69YZ2 307 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 SDE2Q6IQ49 451 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 ERCC4Q92889 916 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-207ENST00000558919 SCYL1Q96KG9 808 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 C16orf92Q96LL3 132 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 RBM15Q96T37 977 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS13C-207ENST00000558919 TARS2Q9BW92 718 aaKnown RBP5.35□□□□□ -1.55
VPS13C-207ENST00000558919 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 SLC4A7Q9Y6M7 1214 aa5.35□□□□□ -1.55
VPS13C-207ENST00000558919 NCANO14594 1321 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 ZNF536O15090 1300 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 A0A0G2JNJ9 132 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 UBA6A0AVT1 1052 aaPredicted RBP5.34□□□□□ -1.55
VPS13C-207ENST00000558919 PRRG2O14669 202 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 PRLP01236 227 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 ATP2A2P16615 1042 aaKnown RBP5.34□□□□□ -1.55
VPS13C-207ENST00000558919 SLC9A1P19634 815 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 GYS2P54840 703 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 ADCY1Q08828 1119 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 MOGSQ13724 837 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 SKOR2Q2VWA4 1001 aaPredicted RBP5.34□□□□□ -1.55
VPS13C-207ENST00000558919 ZMAT1Q5H9K5 638 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 ZZZ3Q8IYH5 903 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 NXPE1Q8N323 547 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 MAML3Q96JK9 1138 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 ELF4Q99607 663 aaPredicted RBP5.34□□□□□ -1.55
VPS13C-207ENST00000558919 SEC61A2Q9H9S3 476 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 Q9UFV3 132 aa5.34□□□□□ -1.55
VPS13C-207ENST00000558919 A0A087X0B3 334 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 ZNF891A8MT65 544 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-207ENST00000558919 GSG1L2A8MUP6 293 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 K7ESM1 405 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 HMGCRP04035 888 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 ZNF888P0CJ79 500 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-207ENST00000558919 PTX3P26022 381 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-207ENST00000558919 ADCY8P40145 1251 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 SCNN1BP51168 640 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 ROM1Q03395 351 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 MAP3K12Q12852 859 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 ZNF827Q17R98 1081 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 TTC38Q5R3I4 469 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 SLFN13Q68D06 897 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 GRAMD4Q6IC98 578 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 OTOP2Q7RTS6 562 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 GPR155Q7Z3F1 870 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 PASD1Q8IV76 773 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 EFHBQ8N7U6 833 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 SSBP3Q9BWW4 388 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-207ENST00000558919 SLKQ9H2G2 1235 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-207ENST00000558919 PPP4R1LQ9P1A2 415 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 MAPRE3Q9UPY8 281 aa5.33□□□□□ -1.56
VPS13C-207ENST00000558919 NPEPPSL1A6NEC2 478 aa5.32□□□□□ -1.56
VPS13C-207ENST00000558919 PDE8AO60658 829 aa5.32□□□□□ -1.56
VPS13C-207ENST00000558919 CNOT4O95628 575 aaKnown RBP5.32□□□□□ -1.56
VPS13C-207ENST00000558919 MYCLP1P12525 358 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-207ENST00000558919 KCNQ1P51787 676 aa5.32□□□□□ -1.56
VPS13C-207ENST00000558919 SLC6A3Q01959 620 aa5.32□□□□□ -1.56
VPS13C-207ENST00000558919 OCRLQ01968 901 aa5.32□□□□□ -1.56
VPS13C-207ENST00000558919 SART3Q15020 963 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms