RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TBC1D22BQ9NU19 505 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 OGFRQ9NZT2 677 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 BTBD7Q9P203 1132 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 ACTN1P12814 892 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 RPL13P26373 211 aaKnown RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 ETF1P62495 437 aaKnown RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 TRIM14Q14142 442 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 CCDC127Q96BQ5 260 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 PANX2Q96RD6 677 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 ZNF215Q9UL58 517 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 PAXBP1Q9Y5B6 917 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 GLG1Q92896 1179 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 WDR24Q96S15 920 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 JPH1Q9HDC5 661 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 CCNE2O96020 404 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 KCTD2Q14681 263 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 STXBP2Q15833 593 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PTPROQ16827 1216 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 HYIQ5T013 277 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 ZNF112Q9UJU3 913 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 FRMD4BQ9Y2L6 1034 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 NOP56O00567 594 aaKnown RBP11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 ABL1P00519 1130 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 TNNT3P45378 269 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 TMEM139Q8IV31 216 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PCDHA10Q9Y5I2 948 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PPP2R3BQ9Y5P8 575 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PITPNM2Q9BZ72 1349 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 HERVK_113P62684 666 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PPP1R16BQ96T49 567 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PSMB7Q99436 277 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 GBP3Q9H0R5 595 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 PUF60Q9UHX1 559 aaKnown RBP11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 UBIAD1Q9Y5Z9 338 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
CSPG4P5-201ENST00000558731 LRRC10BA6NIK2 292 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 ENC1O14682 589 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 CYLC1P35663 651 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 TEX35Q5T0J7 233 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 SLC9A2Q9UBY0 812 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 AKAP3O75969 853 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 PNMA6AP0CW24 399 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 GAP43P17677 238 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 RARRES1P49788 294 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 PSMC5P62195 406 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 KRT76Q01546 638 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 C1orf186Q6ZWK4 172 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 VSIG10LQ86VR7 867 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 CARD6Q9BX69 1037 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 NDUFA10O95299 355 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 FDX1P10109 184 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 PBX1P40424 430 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 ARHGAP44Q17R89 818 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 REXO1L1PQ8IX06 675 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
CSPG4P5-201ENST00000558731 LRRIQ4A6NIV6 560 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 SLC9A1P19634 815 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 POLGP54098 1239 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 SAAL1Q96ER3 474 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 NUP58Q9BVL2 599 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 NHEJ1Q9H9Q4 299 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 GREB1LQ9C091 1923 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 GTF2F1P35269 517 aaKnown RBP eCLIP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 ACTR2P61160 394 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 IGBP1P78318 339 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 ZBED6P86452 979 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 DNAAF5Q86Y56 855 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 CCDC51Q96ER9 411 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 CAPZA3Q96KX2 299 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 NAA15Q9BXJ9 866 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms