RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 DGAT1O75907 488 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 PPP1R2P41236 205 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 ASIC1P78348 528 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 TYRO3Q06418 890 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 MORC3Q14149 939 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
VPS18-202ENST00000558474 XKR9Q5GH70 373 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 PADI6Q6TGC4 694 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 CCDC65Q8IXS2 484 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 BLZF1Q9H2G9 400 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 HMX1Q9NP08 348 aaPredicted RBP16.54■□□□□ 0.24
VPS18-202ENST00000558474 CYP26B1Q9NR63 512 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 KCNG1Q9UIX4 513 aa16.54■□□□□ 0.24
VPS18-202ENST00000558474 COL1A2P08123 1366 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 INHAP05111 366 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 KRT18P05783 430 aaKnown RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 GAP43P17677 238 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 CNGA1P29973 690 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 RFC5P40937 340 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 TRIM32Q13049 653 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 GIT2Q14161 759 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 PKN2Q16513 984 aaKnown RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 FSCN1Q16658 493 aaKnown RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 ZNF658Q5TYW1 1059 aaPredicted RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 MCPH1Q8NEM0 835 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 CEP170P1Q96L14 293 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 JPH2Q9BR39 696 aaPredicted RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 KATNAL1Q9BW62 490 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 SEL1LQ9UBV2 794 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 DDX20Q9UHI6 824 aaKnown RBP16.53■□□□□ 0.24
VPS18-202ENST00000558474 DACH1Q9UI36 760 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 PTCH2Q9Y6C5 1203 aa16.53■□□□□ 0.24
VPS18-202ENST00000558474 H3BRB1 525 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 ZBTB39O15060 712 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 HSPA8P11142 646 aaKnown RBP16.52■□□□□ 0.24
VPS18-202ENST00000558474 ZNF131P52739 623 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 EHHADHQ08426 723 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 TARBP2Q15633 366 aaKnown RBP16.52■□□□□ 0.24
VPS18-202ENST00000558474 KMT5BQ4FZB7 885 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 COBLL1Q53SF7 1204 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 ZNF484Q5JVG2 852 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.24
VPS18-202ENST00000558474 DRC1Q96MC2 740 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
VPS18-202ENST00000558474 TSPY26PQ9H489 355 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
VPS18-202ENST00000558474 C17orf75Q9HAS0 396 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 PDLIM7Q9NR12 457 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 EXOC1Q9NV70 894 aa16.52■□□□□ 0.24
VPS18-202ENST00000558474 SYNRGQ9UMZ2 1314 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 A0A087WWV3 80 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
VPS18-202ENST00000558474 TBCAO75347 108 aaKnown RBP16.51■□□□□ 0.23
VPS18-202ENST00000558474 F2P00734 622 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 CASP1P29466 404 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
VPS18-202ENST00000558474 RTP1P59025 263 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 DYMQ7RTS9 669 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 CTU1Q7Z7A3 348 aaKnown RBP16.51■□□□□ 0.23
VPS18-202ENST00000558474 SLC17A8Q8NDX2 589 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 REEP2Q9BRK0 252 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 RUSC1Q9BVN2 902 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 DHX33Q9H6R0 707 aaKnown RBP16.51■□□□□ 0.23
VPS18-202ENST00000558474 ATP6V0A4Q9HBG4 840 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 MYH11P35749 1972 aa16.51■□□□□ 0.23
VPS18-202ENST00000558474 FRMPD3Q5JV73 1810 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 ADAMTS4O75173 837 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 MAPTP10636 758 aaKnown RBP16.5■□□□□ 0.23
VPS18-202ENST00000558474 IDEP14735 1019 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 SCP2P22307 547 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
VPS18-202ENST00000558474 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 KIFAP3Q92845 792 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 BPIFA3Q9BQP9 254 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
VPS18-202ENST00000558474 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
VPS18-202ENST00000558474 RRN3P2A6NIE6 340 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 HAS3O00219 553 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 MAGEB2O15479 319 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 MAFO75444 373 aaPredicted RBP16.49■□□□□ 0.23
VPS18-202ENST00000558474 FAM13AO94988 1023 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 KIF20AO95235 890 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 C6orf222P0C671 652 aaPredicted RBP16.49■□□□□ 0.23
VPS18-202ENST00000558474 ABCD1P33897 745 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms