RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CDK8P49336 464 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 IRX3P78415 501 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-211ENST00000558440 SLBPQ14493 270 aaKnown RBP eCLIP7.41□□□□□ -1.22
ZEB1-211ENST00000558440 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 TRIB2Q92519 343 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 FOXQ1Q9C009 403 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 ASCC2Q9H1I8 757 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-211ENST00000558440 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
ZEB1-211ENST00000558440 AS3MTQ9HBK9 375 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 PRDM5Q9NQX1 630 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-211ENST00000558440 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 MROH7-TTC4A0A0A0MT08 1334 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 LTBP2Q14767 1821 aa7.41□□□□□ -1.22
ZEB1-211ENST00000558440 SLITRK5O94991 958 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 UBTFL1P0CB47 393 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 ZKSCAN1P17029 563 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 ADORA1P30542 326 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 RASGRF1Q13972 1273 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 NKPD1Q17RQ9 610 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 OGFOD2Q6N063 350 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 AGMOQ6ZNB7 445 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 ATG4DQ86TL0 474 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 SOCS4Q8WXH5 440 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 CWC22Q9HCG8 908 aaKnown RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 TMOD4Q9NZQ9 345 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 MORF4L1Q9UBU8 362 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 PCDHB5Q9Y5E4 795 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 PFASO15067 1338 aa7.4□□□□□ -1.22
ZEB1-211ENST00000558440 PDS5AQ29RF7 1337 aaKnown RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 COL2A1P02458 1487 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-211ENST00000558440 RLFQ13129 1914 aa7.4□□□□□ -1.23
ZEB1-211ENST00000558440 ZNFX1Q9P2E3 1918 aaKnown RBP7.4□□□□□ -1.23
ZEB1-211ENST00000558440 MYH8P13535 1937 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 GPR75-ASB3A0A0A6YYF3 556 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 MAP4K4O95819 1239 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-211ENST00000558440 LDHCP07864 332 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 LIG3P49916 1009 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 CLCN7P51798 805 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 RHBDL3P58872 404 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 ETF1P62495 437 aaKnown RBP7.39□□□□□ -1.23
ZEB1-211ENST00000558440 GSTO1P78417 241 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 JAG1P78504 1218 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 MECOMQ03112 1051 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 SEPT6Q14141 434 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 NKG7Q16617 165 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 MAP3K21Q5TCX8 1036 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 HID1Q8IV36 788 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 MFSD2AQ8NA29 543 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 GPRC5AQ8NFJ5 357 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 LBHD1Q9BQE6 289 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-211ENST00000558440 HERC5Q9UII4 1024 aaKnown RBP7.39□□□□□ -1.23
ZEB1-211ENST00000558440 HDAC5Q9UQL6 1122 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 MUC3AQ02505 3323 aa7.39□□□□□ -1.23
ZEB1-211ENST00000558440 BDP1A6H8Y1 2624 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 GFRA2O00451 464 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 ANP32CO43423 234 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 ASNSP08243 561 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 COL6A1P12109 1028 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 PDIA4P13667 645 aaKnown RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 MAPK4P31152 587 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 RGS2P41220 211 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 TIMM10P62072 90 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 HERVK_113P62684 666 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 DAB2P98082 770 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 CACNB2Q08289 660 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 MVPQ14764 893 aaKnown RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 LRRC26Q2I0M4 334 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 MEI1Q5TIA1 1274 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 FAM109BQ6ICB4 259 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 DNAJC14Q6Y2X3 702 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 C22orf34Q6ZV56 151 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 TEX11Q8IYF3 940 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 FAM9BQ8IZU0 186 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 LRRN4CLQ8ND94 238 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 SSH1Q8WYL5 1049 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 P2RX7Q99572 595 aaKnown RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 MIPEPQ99797 713 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 NOL10Q9BSC4 688 aaKnown RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 RAI14Q9P0K7 980 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 PARP2Q9UGN5 583 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 PA2G4Q9UQ80 394 aaKnown RBP7.38□□□□□ -1.23
ZEB1-211ENST00000558440 TACC3Q9Y6A5 838 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 SMCHD1A6NHR9 2005 aa7.38□□□□□ -1.23
ZEB1-211ENST00000558440 A0A1B0GUL7 405 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 C19orf81C9J6K1 198 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 GLRX3O76003 335 aaKnown RBP7.37□□□□□ -1.23
ZEB1-211ENST00000558440 CCND3P30281 292 aaPredicted RBP7.37□□□□□ -1.23
ZEB1-211ENST00000558440 HOXA7P31268 230 aaPredicted RBP7.37□□□□□ -1.23
ZEB1-211ENST00000558440 BACE1P56817 501 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 GORABQ5T7V8 394 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 POU5F2Q8N7G0 328 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 NSUN4Q96CB9 384 aaKnown RBP7.37□□□□□ -1.23
ZEB1-211ENST00000558440 FAM161BQ96MY7 647 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 NEUROD6Q96NK8 337 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 GUCD1Q96NT3 240 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms