RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CPLX1O14810 134 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 VTNP04004 478 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 RB1P06400 928 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 ATP4AP20648 1035 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
TPM1-211ENST00000558314 SSRP1Q08945 709 aaKnown RBP17.6■□□□□ 0.41
TPM1-211ENST00000558314 ZNF746Q6NUN9 644 aaPredicted RBP17.6■□□□□ 0.41
TPM1-211ENST00000558314 TRIM22Q8IYM9 498 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 KIAA0319LQ8IZA0 1049 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 ZNF668Q96K58 619 aaPredicted RBP17.6■□□□□ 0.41
TPM1-211ENST00000558314 OSMRQ99650 979 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 C1QTNF1Q9BXJ1 281 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
TPM1-211ENST00000558314 NLRC5Q86WI3 1866 aa17.6■□□□□ 0.41
TPM1-211ENST00000558314 COL1A2P08123 1366 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 FAM86C2PA6NEL3 165 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 NTRK3Q16288 839 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 RUFY3Q7L099 469 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.41
TPM1-211ENST00000558314 GJA10Q969M2 543 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 ZNF689Q96CS4 500 aaPredicted RBP17.59■□□□□ 0.41
TPM1-211ENST00000558314 UPF3BQ9BZI7 483 aaKnown RBP17.59■□□□□ 0.41
TPM1-211ENST00000558314 TMX1Q9H3N1 280 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 RC3H2Q9HBD1 1191 aaKnown RBP17.59■□□□□ 0.41
TPM1-211ENST00000558314 CD320Q9NPF0 282 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 ST3GAL5Q9UNP4 418 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 AKT3Q9Y243 479 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 PCDHB7Q9Y5E2 793 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 CYP46A1Q9Y6A2 500 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 SQORQ9Y6N5 450 aa17.59■□□□□ 0.41
TPM1-211ENST00000558314 BDP1A6H8Y1 2624 aa17.58■□□□□ 0.41
TPM1-211ENST00000558314 C22orf31O95567 290 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 NEFLP07196 543 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 IFNAR1P17181 557 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 CLCN3P51790 818 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 TOB2Q14106 344 aaPredicted RBP17.58■□□□□ 0.4
TPM1-211ENST00000558314 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
TPM1-211ENST00000558314 CMTR2Q8IYT2 770 aaKnown RBP17.58■□□□□ 0.4
TPM1-211ENST00000558314 TMEM40Q8WWA1 233 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 CRYGNQ8WXF5 182 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.4
TPM1-211ENST00000558314 PABPC5Q96DU9 382 aaKnown RBP17.58■□□□□ 0.4
TPM1-211ENST00000558314 SCLT1Q96NL6 688 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 ADAM2Q99965 735 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 ERVK-5Q9HDB9 667 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 MUC3AQ02505 3323 aa17.58■□□□□ 0.4
TPM1-211ENST00000558314 MYO7AQ13402 2215 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 NID2Q14112 1375 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 KDM3AQ9Y4C1 1321 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 TBKBP1A7MCY6 615 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 WDR64B1ANS9 1081 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 C5orf67F2Z3F1 127 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 MGEA5O60502 916 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 GAS7O60861 476 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 LINC00271P0C7V0 271 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 GTF2F1P35269 517 aaKnown RBP eCLIP17.57■□□□□ 0.4
TPM1-211ENST00000558314 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
TPM1-211ENST00000558314 GJD3Q8N144 294 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 LRRC71Q8N4P6 559 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 CLP1Q92989 425 aaKnown RBP17.57■□□□□ 0.4
TPM1-211ENST00000558314 LMAN2LQ9H0V9 348 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 DISC1Q9NRI5 854 aa17.57■□□□□ 0.4
TPM1-211ENST00000558314 MAFBQ9Y5Q3 323 aaPredicted RBP17.57■□□□□ 0.4
TPM1-211ENST00000558314 COL4A6Q14031 1691 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 TTC3P53804 2025 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 ZBTB42B2RXF5 422 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 GPR182O15218 404 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 MSH4O15457 936 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 HYAL1Q12794 435 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 ODR4Q5SWX8 454 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 LRCH2Q5VUJ6 765 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 EFCAB12Q6NXP0 572 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 FAM178BQ8IXR5 827 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 KLHL23Q8NBE8 558 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 NEK9Q8TD19 979 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 TBCKQ8TEA7 893 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 MAP7D2Q96T17 732 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 TEKT3Q9BXF9 490 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 PLAGL2Q9UPG8 496 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 LOXHD1Q8IVV2 1947 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 RALGAPA2Q2PPJ7 1873 aa17.56■□□□□ 0.4
TPM1-211ENST00000558314 DTNBO60941 627 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 MMP1P03956 469 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 OATP04181 439 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 ITGB1P05556 798 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 CIITAP33076 1130 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 CRYBB1P53674 252 aaPredicted RBP17.55■□□□□ 0.4
TPM1-211ENST00000558314 NLRP11P59045 1033 aaKnown RBP17.55■□□□□ 0.4
TPM1-211ENST00000558314 PRKCEQ02156 737 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 PUS10Q3MIT2 529 aaKnown RBP17.55■□□□□ 0.4
TPM1-211ENST00000558314 TMEM31Q5JXX7 168 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 FAM102BQ5T8I3 360 aa17.55■□□□□ 0.4
TPM1-211ENST00000558314 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
TPM1-211ENST00000558314 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
TPM1-211ENST00000558314 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms