RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 EPHA7Q15375 998 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ASTE1Q2TB18 679 aaPredicted RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 CEP55Q53EZ4 464 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ARSHQ5FYA8 562 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 FAM83BQ5T0W9 1011 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 OTOP1Q7RTM1 612 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 VPS36Q86VN1 386 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 MMGT1Q8N4V1 131 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 HPS3Q969F9 1004 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 EIF2AK1Q9BQI3 630 aaKnown RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 FUT8Q9BYC5 575 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ANKZF1Q9H8Y5 726 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 MED4Q9NPJ6 270 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ARHGAP20Q9P2F6 1191 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 PUF60Q9UHX1 559 aaKnown RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 INTUQ9ULD6 942 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ZBTB21Q9ULJ3 1066 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ZNRF3Q9ULT6 936 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 L1RE1Q9UN81 338 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 MYH4Q9Y623 1939 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 IGLV3-22A0A075B6J6 115 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 GRID2IPA4D2P6 1211 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 LRRC53A6NM62 1247 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 YDJCA8MPS7 323 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 FAM86B1E9PN63 330 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 MEIS1O00470 390 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 GAS7O60861 476 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 PSMD10O75832 226 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 GDF11O95390 407 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 AFPP02771 609 aaKnown RBP9.13□□□□□ -0.95
SPG11-209ENST00000558253 FAM86B2P0C5J1 330 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 XRCC5P13010 732 aaKnown RBP9.13□□□□□ -0.95
SPG11-209ENST00000558253 RFX1P22670 979 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 NR2F2P24468 414 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 CAP2P40123 477 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 KCNMA1Q12791 1236 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
SPG11-209ENST00000558253 TNFAIP1Q13829 316 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 SMC1AQ14683 1233 aaKnown RBP9.13□□□□□ -0.95
SPG11-209ENST00000558253 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 LRRC41Q15345 812 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 ASIC2Q16515 512 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 SLC18A3Q16572 532 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 BEND6Q5SZJ8 279 aaPredicted RBP9.13□□□□□ -0.95
SPG11-209ENST00000558253 LRCH2Q5VUJ6 765 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 XRRA1Q6P2D8 792 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 GBP6Q6ZN66 633 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 HS2ST1Q7LGA3 356 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 SLC9A9Q8IVB4 645 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 CAGE1Q8TC20 777 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 LMBR1Q8WVP7 490 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 HOOK2Q96ED9 719 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 IWS1Q96ST2 819 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 HYOU1Q9Y4L1 999 aa9.13□□□□□ -0.95
SPG11-209ENST00000558253 A0A1W2PRG0 241 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 SHTN1A0MZ66 631 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 OPLAHO14841 1288 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 FAM13AO94988 1023 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 NR3C1P04150 777 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 ICAM1P05362 532 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 GUCY2CP25092 1073 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
SPG11-209ENST00000558253 CHRNA5P30532 468 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 ABCD1P33897 745 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 PSMC2P35998 433 aaKnown RBP9.12□□□□□ -0.95
SPG11-209ENST00000558253 PRKCIP41743 596 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 KLK7P49862 253 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 HSD17B4P51659 736 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 ZNF131P52739 623 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 PTPN5P54829 565 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 PABPC4Q13310 644 aaKnown RBP eCLIP9.12□□□□□ -0.95
SPG11-209ENST00000558253 NAB2Q15742 525 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 CLUL1Q15846 466 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 EXOC3L4Q17RC7 722 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 USH1GQ495M9 461 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 HSP90B2PQ58FF3 399 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 MSL1Q68DK7 614 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 RINT1Q6NUQ1 792 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 C1orf186Q6ZWK4 172 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 NIM1KQ8IY84 436 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 PRPF38AQ8NAV1 312 aaKnown RBP9.12□□□□□ -0.95
SPG11-209ENST00000558253 IPO4Q8TEX9 1081 aaKnown RBP9.12□□□□□ -0.95
SPG11-209ENST00000558253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.12□□□□□ -0.95
SPG11-209ENST00000558253 CAMKK2Q96RR4 588 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 REEP2Q9BRK0 252 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 LSM14BQ9BX40 385 aaKnown RBP9.12□□□□□ -0.95
SPG11-209ENST00000558253 TEKT3Q9BXF9 490 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 LACRTQ9GZZ8 138 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 PARVGQ9HBI0 331 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 JADE2Q9NQC1 790 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 PSD3Q9NYI0 1048 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 KCNG1Q9UIX4 513 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 SIPA1L1O43166 1804 aa9.12□□□□□ -0.95
SPG11-209ENST00000558253 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 TCP10L2B9ZVM9 353 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms