RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 NME8Q8N427 588 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 UBE2OQ9C0C9 1292 aaKnown RBP13.47□□□□□ -0.25
CDK12-203ENST00000558240 WRAP73Q9P2S5 460 aaPredicted RBP13.47□□□□□ -0.25
CDK12-203ENST00000558240 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 SEPT9Q9UHD8 586 aaPredicted RBP13.47□□□□□ -0.25
CDK12-203ENST00000558240 MORC2Q9Y6X9 1032 aaPredicted RBP13.47□□□□□ -0.25
CDK12-203ENST00000558240 TRIOBPQ9H2D6 2365 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 SIP14410 1827 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 C22orf31O95567 290 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 PFKMP08237 780 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 SPATA31C1P0DKV0 1188 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 CSF2RAP15509 400 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 YWHABP31946 246 aaKnown RBP13.46□□□□□ -0.25
CDK12-203ENST00000558240 PKP1Q13835 747 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 PTPAQ15257 358 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 FAM26DQ5JW98 314 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 CATSPER3Q86XQ3 398 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 EXOC8Q8IYI6 725 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 SCLYQ96I15 445 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
CDK12-203ENST00000558240 CEP89Q96ST8 783 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 IL23AQ9NPF7 189 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 CYP26B1Q9NR63 512 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 ANKEF1Q9NU02 776 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
CDK12-203ENST00000558240 A0A1W2PPC1 479 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 MED24O75448 989 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 BRD1O95696 1058 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 TMOD1P28289 359 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 TBC1D8BQ0IIM8 1120 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 MTERF2Q49AM1 385 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 IER5Q5VY09 327 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 ATL3Q6DD88 541 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 KIAA0319LQ8IZA0 1049 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 ZBTB10Q96DT7 871 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 AK8Q96MA6 479 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 NACC1Q96RE7 527 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
CDK12-203ENST00000558240 LAMA3Q16787 3333 aa13.45□□□□□ -0.26
CDK12-203ENST00000558240 IGKV6-21A0A0C4DH24 114 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 MAFO75444 373 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 CHRNA1P02708 482 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 CXCL10P02778 98 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 CCT6AP40227 531 aaKnown RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 EPHB4P54760 987 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 MRPS6P82932 125 aaKnown RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 GPNMBQ14956 572 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 SLC39A14Q15043 492 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 EFCAB12Q6NXP0 572 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 PSRC1Q6PGN9 363 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 C16orf59Q7L2K0 433 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 METTL13Q8N6R0 699 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 FOXD4L4Q8WXT5 416 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 VWCEQ96DN2 955 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 CEP170P1Q96L14 293 aa13.44□□□□□ -0.26
CDK12-203ENST00000558240 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDK12-203ENST00000558240 FAM49AQ9H0Q0 323 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
CDK12-203ENST00000558240 M0QZ92 97 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 ZBTB39O15060 712 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 SLC26A4O43511 780 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 NBNO60934 754 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 CTSHP09668 335 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 LONP1P36776 959 aaKnown RBP13.43□□□□□ -0.26
CDK12-203ENST00000558240 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
CDK12-203ENST00000558240 RFC5P40937 340 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 NPEPPSP55786 919 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
CDK12-203ENST00000558240 MGAT3Q09327 533 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 MBTPS1Q14703 1052 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 XKR9Q5GH70 373 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 TMEM240Q5SV17 173 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 MICAL3Q7RTP6 2002 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 TDHQ8IZJ6 230 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 KCTD17Q8N5Z5 321 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 SLC7A3Q8WY07 619 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 SH2D3AQ9BRG2 576 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 MMTAG2Q9BU76 263 aaKnown RBP13.43□□□□□ -0.26
CDK12-203ENST00000558240 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
CDK12-203ENST00000558240 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
CDK12-203ENST00000558240 ZDHHC9Q9Y397 364 aa13.43□□□□□ -0.26
CDK12-203ENST00000558240 SRPRBQ9Y5M8 271 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms