RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 GLT1D1Q96MS3 346 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 USP28Q96RU2 1077 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 TEKT3Q9BXF9 490 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 RNPEPQ9H4A4 650 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 ZSCAN16Q9H4T2 348 aaPredicted RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 TTC12Q9H892 705 aaPredicted RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 STARD7Q9NQZ5 370 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 PCDHA10Q9Y5I2 948 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 MAFBQ9Y5Q3 323 aaPredicted RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 MORC2Q9Y6X9 1032 aaPredicted RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 RANBP2P49792 3224 aaKnown RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 A0A0U1RQG5 324 aaPredicted RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 WDR64B1ANS9 1081 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 ARVCFO00192 962 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 CHMP2AO43633 222 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 ZEB2O60315 1214 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 NR1I2O75469 434 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 SPATA31C1P0DKV0 1188 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 SFNP31947 248 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 TXKP42681 527 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 NASPP49321 788 aaPredicted RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 JAK3P52333 1124 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 PLCB4Q15147 1175 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 SF3A1Q15459 793 aaKnown RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 KIAA0753Q2KHM9 967 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 TRIM60Q495X7 471 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 MARCH8Q5T0T0 291 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 UTP14CQ5TAP6 766 aaKnown RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 NFRKBQ6P4R8 1299 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 PLPPR4Q7Z2D5 763 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 ZNF598Q86UK7 904 aaKnown RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 HSD17B14Q9BPX1 270 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.78
CHD8-214ENST00000557727 DISC1Q9NRI5 854 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 PCDHA12Q9UN75 941 aa10.15□□□□□ -0.78
CHD8-214ENST00000557727 RBAK-RBAKDNI3L0D1 243 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 LAD1O00515 517 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 B4GALT4O60513 344 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 SLITRK3O94933 977 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 ADH1BP00325 375 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 ANP32AP39687 249 aaKnown RBP10.14□□□□□ -0.79
CHD8-214ENST00000557727 STAT5BP51692 787 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 RTP1P59025 263 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 PRR20EP86478 221 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 PRR20CP86479 221 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 PRR20DP86480 221 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 PRR20BP86481 221 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 PRR20AP86496 221 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 BRDTQ58F21 947 aaPredicted RBP10.14□□□□□ -0.79
CHD8-214ENST00000557727 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 GDF6Q6KF10 455 aaPredicted RBP10.14□□□□□ -0.79
CHD8-214ENST00000557727 SWSAP1Q6NVH7 229 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 MIS18BP1Q6P0N0 1132 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 MIER3Q7Z3K6 550 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 WNT8BQ93098 351 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 TOX2Q96NM4 488 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 SMARCAD1Q9H4L7 1026 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 ZNF302Q9NR11 478 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 RGL1Q9NZL6 768 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 GABBR1Q9UBS5 961 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 GTF2IRD1Q9UHL9 959 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 FBXO2Q9UK22 296 aaPredicted RBP10.14□□□□□ -0.79
CHD8-214ENST00000557727 MYH11P35749 1972 aa10.14□□□□□ -0.79
CHD8-214ENST00000557727 MBLAC1A4D2B0 266 aaPredicted RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 TMEM150BA6NC51 233 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 PP2D1A8MPX8 630 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 MED24O75448 989 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 S1PR4O95977 384 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 PSAPP07602 524 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 SMIM10L2AP0DMW4 78 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 SMIM10L2BP0DMW5 78 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 ITGB8P26012 769 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 MARK3P27448 753 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 TECP42680 631 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 SLC26A2P50443 739 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 ZNF200P98182 395 aaPredicted RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 PRKCEQ02156 737 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 TLE2Q04725 743 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 DNM1Q05193 864 aaKnown RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 PTPN11Q06124 597 aaPredicted RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 FAAP100Q0VG06 881 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 SLC39A14Q15043 492 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 EPHA7Q15375 998 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 TARBP2Q15633 366 aaKnown RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 ECM1Q16610 540 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 ARL6IP4Q66PJ3 421 aaKnown RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 SH3RF1Q7Z6J0 888 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 LINC00301Q8NCQ3 95 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 BANK1Q8NDB2 785 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 ATP8B4Q8TF62 1192 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 LRRC15Q8TF66 581 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 DHX38Q92620 1227 aaKnown RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 EIF2AK1Q9BQI3 630 aaKnown RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 KATNAL1Q9BW62 490 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 TRPV6Q9H1D0 765 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms