RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PSTPIP2Q9H939 334 aa12.87□□□□□ -0.35
VIPAS39-211ENST00000557658 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
VIPAS39-211ENST00000557658 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
VIPAS39-211ENST00000557658 TTC7AQ9ULT0 858 aaPredicted RBP12.87□□□□□ -0.35
VIPAS39-211ENST00000557658 DNM1LO00429 736 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 PDXKO00764 312 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 PPP1R11O60927 126 aaPredicted RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 FERP16591 822 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 JAM2P57087 298 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 RHBDL3P58872 404 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 NEDD9Q14511 834 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 PREPLQ4J6C6 727 aaPredicted RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 TCERG1LQ5VWI1 586 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 HOOK3Q86VS8 718 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 SLF2Q8IX21 1173 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 GIMAP7Q8NHV1 300 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 U2AF1L4Q8WU68 220 aaKnown RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 CELF4Q9BZC1 486 aaKnown RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 PPFIA2O75334 1257 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 GFPT2O94808 682 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 SCTRP47872 440 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 CASP5P51878 434 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 GRAPQ13588 217 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 PPP2R5EQ16537 467 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 C15orf52Q6ZUT6 534 aaKnown RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 GRAPLQ8TC17 118 aaPredicted RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 CENPTQ96BT3 561 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 FMO2Q99518 471 aa12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
VIPAS39-211ENST00000557658 DCDC2CA8MYV0 355 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 MED24O75448 989 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 FGGP02679 453 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 DRD4P21917 467 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 RPL13P26373 211 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 EIF6P56537 245 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 BYSLQ13895 437 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 TLCD1Q96CP7 247 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 KCNMB3Q9NPA1 279 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 SIX2Q9NPC8 291 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 ATP8A1Q9Y2Q0 1164 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 PHF20L1A8MW92 1017 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 BACH1O14867 736 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 ZBTB5O15062 677 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 SLC16A3O15427 465 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 GHRP10912 638 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 AKR1B1P15121 316 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 STAT1P42224 750 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 GALCP54803 685 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 GIT2Q14161 759 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 POTEEQ6S8J3 1075 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 SFR1Q86XK3 245 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 CHMP6Q96FZ7 201 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 XPO6Q96QU8 1125 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 NAP1L3Q99457 506 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 HAUS2Q9NVX0 235 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-211ENST00000557658 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 GOLGA6L10A0A0M3HER8 536 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 AKAP3O75969 853 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 TTLL1O95922 423 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 KCNQ4P56696 695 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 NFIXQ14938 502 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 ERMARDQ5T6L9 678 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 WLSQ5T9L3 541 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 DPP8Q6V1X1 898 aaPredicted RBP12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 MAGEC3Q8TD91 643 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 HVCN1Q96D96 273 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 TRIM51Q9BSJ1 452 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 TXLNGYQ9BZA5 131 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 CD209Q9NNX6 404 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 TYW1Q9NV66 732 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 NCANO14594 1321 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 GTPBP10A4D1E9 387 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 NR3C1P04150 777 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 LMNB1P20700 586 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 STAT3P40763 770 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 PTENP60484 403 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 XRCC4Q13426 336 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 TTBK2Q6IQ55 1244 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms