RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 USH1GQ495M9 461 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 ARHGEF16Q5VV41 709 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 GIMAP6Q6P9H5 292 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 KCNV1Q6PIU1 500 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 TSSK4Q6SA08 328 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 GPR149Q86SP6 731 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 CABP7Q86V35 215 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 TMEM121BQ9BXQ6 578 aaPredicted RBP15.41■□□□□ 0.06
TMEM260-215ENST00000557626 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 PUS7LQ9H0K6 701 aaKnown RBP15.41■□□□□ 0.06
TMEM260-215ENST00000557626 CWH43Q9H720 699 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 DDX19BQ9UMR2 479 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 FREM2Q5SZK8 3169 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 GSG1L2A8MUP6 293 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
TMEM260-215ENST00000557626 SARSP49591 514 aaKnown RBP15.4■□□□□ 0.06
TMEM260-215ENST00000557626 STARD6P59095 220 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 LURAP1LQ8IV03 231 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 SYTL5Q8TDW5 730 aaPredicted RBP15.4■□□□□ 0.06
TMEM260-215ENST00000557626 USP26Q9BXU7 913 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 FAM126AQ9BYI3 521 aaPredicted RBP15.4■□□□□ 0.06
TMEM260-215ENST00000557626 C1orf115Q9H7X2 142 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 SFXN1Q9H9B4 322 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 COL20A1Q9P218 1284 aa15.4■□□□□ 0.06
TMEM260-215ENST00000557626 ADAMTS20P59510 1910 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 LAMA1P25391 3075 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 NOP56O00567 594 aaKnown RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 N4BP1O75113 896 aaKnown RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 UBA1P22314 1058 aaKnown RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 MAGEA9P43362 315 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 LIMK1P53667 647 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 PAK2Q13177 524 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 UBXN2BQ14CS0 331 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 AASDHQ4L235 1098 aaPredicted RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 FAM102BQ5T8I3 360 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 GLG1Q92896 1179 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 MAP4K1Q92918 833 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 NXPE3Q969Y0 559 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 PADI3Q9ULW8 664 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 PCDHB15Q9Y5E8 787 aa15.39■□□□□ 0.05
TMEM260-215ENST00000557626 FRMPD2Q68DX3 1309 aaPredicted RBP15.39■□□□□ 0.05
TMEM260-215ENST00000557626 KANSL1LA0AUZ9 987 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 EIF4E1BA6NMX2 242 aaKnown RBP15.38■□□□□ 0.05
TMEM260-215ENST00000557626 TM4SF5O14894 197 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 KCNK5O95279 499 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 NR3C2P08235 984 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 PDE4AP27815 886 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 TDO2P48775 406 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 MRPS6P82932 125 aaKnown RBP15.38■□□□□ 0.05
TMEM260-215ENST00000557626 SP2Q02086 613 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
TMEM260-215ENST00000557626 KCNT2Q6UVM3 1135 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 TRIM50Q86XT4 487 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 SIRT2Q8IXJ6 389 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 CELF5Q8N6W0 485 aaKnown RBP15.38■□□□□ 0.05
TMEM260-215ENST00000557626 DNAJB3Q8WWF6 145 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 TBC1D5Q92609 795 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 ZNF558Q96NG5 402 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 MYL10Q9BUA6 226 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 SQORQ9Y6N5 450 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 TENM4Q6N022 2769 aa15.38■□□□□ 0.05
TMEM260-215ENST00000557626 DOCK8Q8NF50 2099 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.37■□□□□ 0.05
TMEM260-215ENST00000557626 PBX3P40426 434 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 FOXC1Q12948 553 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 GATA6Q92908 595 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 STRBPQ96SI9 672 aaKnown RBP15.37■□□□□ 0.05
TMEM260-215ENST00000557626 MAF1Q9H063 256 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 SLC2A4RGQ9NR83 387 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 SPG21Q9NZD8 308 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 EPS15L1Q9UBC2 864 aa15.37■□□□□ 0.05
TMEM260-215ENST00000557626 CXCL14O95715 111 aa15.36■□□□□ 0.05
TMEM260-215ENST00000557626 SPINK2P20155 84 aa15.36■□□□□ 0.05
TMEM260-215ENST00000557626 PSAPL1Q6NUJ1 521 aa15.36■□□□□ 0.05
TMEM260-215ENST00000557626 PRMT8Q9NR22 394 aaPredicted RBP15.36■□□□□ 0.05
TMEM260-215ENST00000557626 PXMP2Q9NR77 195 aa15.36■□□□□ 0.05
TMEM260-215ENST00000557626 M0QZ92 97 aa15.35■□□□□ 0.05
TMEM260-215ENST00000557626 NMT2O60551 498 aa15.35■□□□□ 0.05
TMEM260-215ENST00000557626 MYCLP12524 364 aaPredicted RBP15.35■□□□□ 0.05
TMEM260-215ENST00000557626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.35■□□□□ 0.05
TMEM260-215ENST00000557626 STAMQ92783 540 aa15.35■□□□□ 0.05
TMEM260-215ENST00000557626 OSBPL6Q9BZF3 934 aa15.35■□□□□ 0.05
TMEM260-215ENST00000557626 TMX1Q9H3N1 280 aa15.35■□□□□ 0.05
TMEM260-215ENST00000557626 EPB41L4AQ9HCS5 686 aaPredicted RBP15.35■□□□□ 0.05
TMEM260-215ENST00000557626 TUBE1Q9UJT0 475 aa15.35■□□□□ 0.05
TMEM260-215ENST00000557626 MTF2Q9Y483 593 aaPredicted RBP15.35■□□□□ 0.05
TMEM260-215ENST00000557626 DOCK5Q9H7D0 1870 aa15.34■□□□□ 0.05
TMEM260-215ENST00000557626 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
TMEM260-215ENST00000557626 FAM170BA6NMN3 283 aa15.34■□□□□ 0.05
TMEM260-215ENST00000557626 TGFB3P10600 412 aa15.34■□□□□ 0.05
TMEM260-215ENST00000557626 NRLP54845 237 aa15.34■□□□□ 0.05
TMEM260-215ENST00000557626 SNW1Q13573 536 aaKnown RBP15.34■□□□□ 0.05
TMEM260-215ENST00000557626 UTP14CQ5TAP6 766 aaKnown RBP15.34■□□□□ 0.05
TMEM260-215ENST00000557626 IER5Q5VY09 327 aa15.34■□□□□ 0.05
TMEM260-215ENST00000557626 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms