RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CDK5RAP3Q96JB5 506 aa12.69□□□□□ -0.38
APEX1-220ENST00000557592 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
APEX1-220ENST00000557592 NIFKQ9BYG3 293 aaKnown RBP12.69□□□□□ -0.38
APEX1-220ENST00000557592 PDLIM7Q9NR12 457 aa12.69□□□□□ -0.38
APEX1-220ENST00000557592 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
APEX1-220ENST00000557592 EVPLQ92817 2033 aa12.69□□□□□ -0.38
APEX1-220ENST00000557592 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 ARID2Q68CP9 1835 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 ZBTB42B2RXF5 422 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 LYPLA2O95372 231 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 MUTP22033 750 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 KLRC1P26715 233 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 TXLNAP40222 546 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 NPEPPSP55786 919 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 TBC1D8BQ0IIM8 1120 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 PTK7Q13308 1070 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 MTHFD1LQ6UB35 978 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 RUFY4Q6ZNE9 571 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 SERINC5Q86VE9 423 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
APEX1-220ENST00000557592 EPSTI1Q96J88 318 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 CEP170P1Q96L14 293 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 PLIN2Q99541 437 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 SCAND2PQ9GZW5 306 aaPredicted RBP12.68□□□□□ -0.38
APEX1-220ENST00000557592 CYP26B1Q9NR63 512 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 PRKAG2Q9UGJ0 569 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 TBX21Q9UL17 535 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 KIAA1024Q9UPX6 916 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
APEX1-220ENST00000557592 MBLAC1A4D2B0 266 aaPredicted RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 TRIM43BA6NCK2 446 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 C22orf31O95567 290 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 GRB10Q13322 594 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 TARBP2Q15633 366 aaKnown RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 USP49Q70CQ1 688 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 METTL13Q8N6R0 699 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 SYMPKQ92797 1274 aaKnown RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 WNT8BQ93098 351 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 CALML4Q96GE6 196 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 PNMA5Q96PV4 448 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 FAM49AQ9H0Q0 323 aaPredicted RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 HIPK3Q9H422 1215 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 GDPD2Q9HCC8 539 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 ANKEF1Q9NU02 776 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 ZMYND8Q9ULU4 1186 aaPredicted RBP12.67□□□□□ -0.38
APEX1-220ENST00000557592 PCDHA7Q9UN72 937 aa12.67□□□□□ -0.38
APEX1-220ENST00000557592 LOXHD1Q8IVV2 1947 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 KIAA0355O15063 1070 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 MAGEB2O15479 319 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 SLC26A4O43511 780 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
APEX1-220ENST00000557592 RAG1P15918 1043 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 SYN1P17600 705 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 THPOP40225 353 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 RARRES1P49788 294 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 POLGP54098 1239 aaPredicted RBP12.66□□□□□ -0.38
APEX1-220ENST00000557592 BFSP2Q13515 415 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 HYIQ5T013 277 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 AXDND1Q5T1B0 1012 aaPredicted RBP12.66□□□□□ -0.38
APEX1-220ENST00000557592 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 DNAJB3Q8WWF6 145 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
APEX1-220ENST00000557592 PPP1R12CQ9BZL4 782 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 CCSER1Q9C0I3 900 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 SUGCTQ9HAC7 445 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
APEX1-220ENST00000557592 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 CCDC39Q9UFE4 941 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
APEX1-220ENST00000557592 DNM3Q9UQ16 869 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
APEX1-220ENST00000557592 UMODL1Q5DID0 1318 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 SMIM35A0A1B0GVV1 85 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 ARHGEF35A5YM69 484 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 E9PMD0 336 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 PLCG1P19174 1290 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 CYP2C18P33260 490 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 RFC5P40937 340 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 CLCN3P51790 818 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 TRIM71Q2Q1W2 868 aaKnown RBP12.65□□□□□ -0.38
APEX1-220ENST00000557592 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 EFCAB12Q6NXP0 572 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 SHC4Q6S5L8 630 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 KCNK18Q7Z418 384 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 LRRC71Q8N4P6 559 aa12.65□□□□□ -0.38
APEX1-220ENST00000557592 CAGE1Q8TC20 777 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms