RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 CEP131Q9UPN4 1083 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 BRCA2P51587 3418 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 ADAMTS3O15072 1205 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 TBX3O15119 743 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 HBP1O60381 514 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 CAND2O75155 1236 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 LGR5O75473 907 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 ZMYND10O75800 440 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 ATG7O95352 703 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 SELPP16109 830 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 PDCP20941 246 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 GJB2P29033 226 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 THPOP40225 353 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 NPY5RQ15761 445 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 GRIK4Q16099 956 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 CALCRLQ16602 461 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 LRRC8DQ7L1W4 858 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 HSCBQ8IWL3 235 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 FBXO18Q8NFZ0 1043 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 SETD4Q9NVD3 440 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 GABBR1Q9UBS5 961 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 TUBE1Q9UJT0 475 aa9.38□□□□□ -0.91
PSEN1-223ENST00000557511 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 DHX15O43143 795 aaKnown RBP9.37□□□□□ -0.91
PSEN1-223ENST00000557511 TREHO43280 583 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 NEMFO60524 1076 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 CCNE2O96020 404 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 IQCF3P0C7M6 154 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 INSRRP14616 1297 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 ITGB8P26012 769 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 ORC2Q13416 577 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-223ENST00000557511 PLCB4Q15147 1175 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 SHHQ15465 462 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 ZNF484Q5JVG2 852 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
PSEN1-223ENST00000557511 TRMT1LQ7Z2T5 733 aaKnown RBP9.37□□□□□ -0.91
PSEN1-223ENST00000557511 DEFB128Q7Z7B8 93 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 SERINC5Q86VE9 423 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 LMBR1Q8WVP7 490 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 NLRP7Q8WX94 980 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 SCLYQ96I15 445 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 CCDC43Q96MW1 224 aaKnown RBP9.37□□□□□ -0.91
PSEN1-223ENST00000557511 MBOAT7Q96N66 472 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 UNC45AQ9H3U1 944 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 DAXXQ9UER7 740 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-223ENST00000557511 COL1A2P08123 1366 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 ALPK3Q96L96 1907 aa9.37□□□□□ -0.91
PSEN1-223ENST00000557511 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
PSEN1-223ENST00000557511 UMODL1Q5DID0 1318 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 SLC37A4O43826 429 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 PSMD10O75832 226 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 ACRP10323 421 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 CKBP12277 381 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 TMOD1P28289 359 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 MCM7P33993 719 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 KCNJ6P48051 423 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 TRAPPC10P48553 1259 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
PSEN1-223ENST00000557511 TMEM266Q2M3C6 531 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 LRIT3Q3SXY7 679 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 IER5Q5VY09 327 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 NCAPH2Q6IBW4 605 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 ZNF365Q70YC5 407 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 NOSTRINQ8IVI9 506 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 CCDC60Q8IWA6 550 aaPredicted RBP9.36□□□□□ -0.91
PSEN1-223ENST00000557511 ETNPPLQ8TBG4 499 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 LENG9Q96B70 501 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.915e-7■■■□□ 18.9
PSEN1-223ENST00000557511 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 RAB34Q9BZG1 259 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 PRO3102Q9H379 93 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 PCDHA12Q9UN75 941 aa9.36□□□□□ -0.91
PSEN1-223ENST00000557511 IGKV6D-21A0A0A0MT36 114 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-223ENST00000557511 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-223ENST00000557511 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 KIF28PB7ZC32 967 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 K7ELQ4 463 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-223ENST00000557511 MAGEB2O15479 319 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 EFCAB14O75071 495 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 CTSHP09668 335 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 TXKP42681 527 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 PSMC5P62195 406 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 RBL2Q08999 1139 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 PPP2R5CQ13362 524 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 XKR3Q5GH77 459 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 TTC38Q5R3I4 469 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 TMEM240Q5SV17 173 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 ZNF618Q5T7W0 954 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 OTUD6AQ7L8S5 288 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 OTOP2Q7RTS6 562 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms