RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SLC9A7Q96T83 725 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
SLIRP-209ENST00000557342 FAM49AQ9H0Q0 323 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-209ENST00000557342 CXXC1Q9P0U4 656 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-209ENST00000557342 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-209ENST00000557342 CDY2AQ9Y6F7 541 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 SQORQ9Y6N5 450 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 C22orf31O95567 290 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 OR52Z1P0C646 297 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 TMOD1P28289 359 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 KCNJ6P48051 423 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 FAM109BQ6ICB4 259 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-209ENST00000557342 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 USP38Q8NB14 1042 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 TMEM60Q9H2L4 133 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 TRPV2Q9Y5S1 764 aa14.01□□□□□ -0.17
SLIRP-209ENST00000557342 KDM3AQ9Y4C1 1321 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 DDX11L8A8MPP1 907 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 ATP2A2P16615 1042 aaKnown RBP14□□□□□ -0.17
SLIRP-209ENST00000557342 TBC1D8BQ0IIM8 1120 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 TARBP2Q15633 366 aaKnown RBP14□□□□□ -0.17
SLIRP-209ENST00000557342 RAB30Q15771 203 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 TMEM266Q2M3C6 531 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 EFCAB12Q6NXP0 572 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 EXOC8Q8IYI6 725 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 KIAA0319LQ8IZA0 1049 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 METTL13Q8N6R0 699 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 DBF4BQ8NFT6 615 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 ZBTB10Q96DT7 871 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 DYDC2Q96IM9 177 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 JPH2Q9BR39 696 aaPredicted RBP14□□□□□ -0.17
SLIRP-209ENST00000557342 LXNQ9BS40 222 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 CELF4Q9BZC1 486 aaKnown RBP14□□□□□ -0.17
SLIRP-209ENST00000557342 ZSWIM4Q9H7M6 989 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 MSRAQ9UJ68 235 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 PPME1Q9Y570 386 aa14□□□□□ -0.17
SLIRP-209ENST00000557342 TMEM265A0A087WTH1 108 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 LAD1O00515 517 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 STBD1O95210 358 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 TOB1P50616 345 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-209ENST00000557342 WDR5P61964 334 aaKnown RBP13.99□□□□□ -0.17
SLIRP-209ENST00000557342 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 FBXO47Q5MNV8 452 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 ODR4Q5SWX8 454 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 ZNF697Q5TEC3 545 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 FAM43BQ6ZT52 329 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-209ENST00000557342 MAP7D2Q96T17 732 aa13.99□□□□□ -0.17
SLIRP-209ENST00000557342 EIF2AK1Q9BQI3 630 aaKnown RBP13.99□□□□□ -0.17
SLIRP-209ENST00000557342 IFIH1Q9BYX4 1025 aaKnown RBP13.99□□□□□ -0.17
SLIRP-209ENST00000557342 RANBP2P49792 3224 aaKnown RBP13.99□□□□□ -0.17
SLIRP-209ENST00000557342 SLITRK3O94933 977 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 GHRP10912 638 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 DNAJB2P25686 324 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 YWHABP31946 246 aaKnown RBP13.98□□□□□ -0.17
SLIRP-209ENST00000557342 TECP42680 631 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 DNM2P50570 870 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 CDC42EP1Q00587 391 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 CYP4A11Q02928 519 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 CTTNQ14247 550 aaKnown RBP13.98□□□□□ -0.17
SLIRP-209ENST00000557342 LPIN1Q14693 890 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 ANO5Q75V66 913 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 BRAPQ7Z569 592 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 TPH2Q8IWU9 490 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 HSD17B14Q9BPX1 270 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 PBX4Q9BYU1 374 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 RAB34Q9BZG1 259 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 SUGCTQ9HAC7 445 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.98□□□□□ -0.17
SLIRP-209ENST00000557342 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 AKT3Q9Y243 479 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 PCDHB6Q9Y5E3 794 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
SLIRP-209ENST00000557342 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-209ENST00000557342 POTEMA6NI47 508 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 GRXCR1A8MXD5 290 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 LYPLA2O95372 231 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 AMHP03971 560 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 PRPHP41219 470 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.17
SLIRP-209ENST00000557342 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-209ENST00000557342 PTGDRQ13258 359 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 NBR1Q14596 966 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 LRRC71Q8N4P6 559 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 LINC01465Q8N7H1 131 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 C4orf32Q8N8J7 132 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 TIFAQ96CG3 184 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 CEP89Q96ST8 783 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 PCDHA11Q9Y5I1 949 aa13.97□□□□□ -0.17
SLIRP-209ENST00000557342 MYH15Q9Y2K3 1946 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms