RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CDC42BPBQ9Y5S2 1711 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 PREX2Q70Z35 1606 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 ABCC2Q92887 1545 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 SPATA31E1Q6ZUB1 1445 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 ANKRD50Q9ULJ7 1429 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 ROCK2O75116 1388 aaKnown RBP6.1□□□□□ -1.43
ATXN3-246ENST00000557030 EFCAB14O75071 495 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 IL18BPO95998 194 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 ENO2P09104 434 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-246ENST00000557030 PDE6AP16499 860 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 KCNA6P17658 529 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 IRX6P78412 446 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-246ENST00000557030 PFKPQ01813 784 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 SKIDA1Q1XH10 827 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 FIGNQ5HY92 759 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 PRAMEF18Q5VWM3 479 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 OSTM1Q86WC4 334 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 NLGN4XQ8N0W4 816 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 LGI4Q8N135 537 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 CROTQ9UKG9 612 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 INVSQ9Y283 1065 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 NOP58Q9Y2X3 529 aaKnown RBP6.1□□□□□ -1.43
ATXN3-246ENST00000557030 TSPOAP1O95153 1857 aa6.1□□□□□ -1.43
ATXN3-246ENST00000557030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 RNF123Q5XPI4 1314 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 ESYT3A0FGR9 886 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 RASGRP1O95267 797 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 RAPGEF3O95398 923 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 PLATP00750 562 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 PTPN1P18031 435 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 ANP32AP39687 249 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 JAM2P57087 298 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 DBPQ10586 325 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 HHIPL2Q6UWX4 724 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 BRAPQ7Z569 592 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 ZC3H7AQ8IWR0 971 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 FAM9BQ8IZU0 186 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 MRPL4Q9BYD3 311 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 L2HGDHQ9H9P8 463 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 CATSPERZQ9NTU4 200 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 ADAM29Q9UKF5 820 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 NUDCQ9Y266 331 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 PPRC1Q5VV67 1664 aaKnown RBP6.09□□□□□ -1.43
ATXN3-246ENST00000557030 TTC37Q6PGP7 1564 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 MAST1Q9Y2H9 1570 aa6.09□□□□□ -1.43
ATXN3-246ENST00000557030 UHRF1BP1LA0JNW5 1464 aa6.09□□□□□ -1.44
ATXN3-246ENST00000557030 CCDC141Q6ZP82 1450 aa6.09□□□□□ -1.44
ATXN3-246ENST00000557030 KTN1Q86UP2 1357 aaKnown RBP6.08□□□□□ -1.44
ATXN3-246ENST00000557030 KIF7Q2M1P5 1343 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-246ENST00000557030 CCDC66A2RUB6 948 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 CLASP2O75122 1294 aaKnown RBP6.08□□□□□ -1.44
ATXN3-246ENST00000557030 KRT15P19012 456 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 DNM2P50570 870 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 ST5P78524 1137 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 PLP2Q04941 152 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 PHF19Q5T6S3 580 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 FGD2Q7Z6J4 655 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 PTRH1Q86Y79 214 aaKnown RBP6.08□□□□□ -1.44
ATXN3-246ENST00000557030 KLHL36Q8N4N3 616 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 IGDCC4Q8TDY8 1250 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 RNPC3Q96LT9 517 aaKnown RBP6.08□□□□□ -1.44
ATXN3-246ENST00000557030 CELF4Q9BZC1 486 aaKnown RBP6.08□□□□□ -1.44
ATXN3-246ENST00000557030 TMEM168Q9H0V1 697 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 ZFP69BQ9UJL9 534 aa6.08□□□□□ -1.44
ATXN3-246ENST00000557030 NUP155O75694 1391 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 KIF15Q9NS87 1388 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 KCNK3O14649 394 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 ASMTLO95671 621 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 C4BPAP04003 597 aaKnown RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 APPP05067 770 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 TSPY4P0CV99 314 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 TSPY10P0CW01 314 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 GJA4P35212 333 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 DEKP35659 375 aaKnown RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 NFATC3Q12968 1075 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 SEC23AQ15436 765 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 SPATS1Q496A3 300 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 BTBD8Q5XKL5 378 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 GIMAP6Q6P9H5 292 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 ABHD17CQ6PCB6 329 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 TRMT10BQ6PF06 316 aaKnown RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 BORAQ6PGQ7 559 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 OVCH1Q7RTY7 1134 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 FAM124AQ86V42 546 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 NOSTRINQ8IVI9 506 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 CISD2Q8N5K1 135 aaKnown RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 NUDT10Q8NFP7 164 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 NUDT11Q96G61 164 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 MAGEB10Q96LZ2 347 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 KATNBL1Q9H079 304 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 BTBD7Q9P203 1132 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 COQ6Q9Y2Z9 468 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms