RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 CROCC2H7BZ55 1655 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 IL9RQ01113 521 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 KIF23Q02241 960 aaPredicted RBP12.87□□□□□ -0.35
NEK9-210ENST00000557026 PTH1RQ03431 593 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 FAM151AQ8WW52 585 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 ATP2C2O75185 946 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 KRT1P04264 644 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 GTF2A2P52657 109 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 ZNF131P52739 623 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
NEK9-210ENST00000557026 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 ECEL1O95672 775 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 GPATCH11Q8N954 259 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 YWHAGP61981 247 aaKnown RBP eCLIP12.86□□□□□ -0.35
NEK9-210ENST00000557026 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 DNAAF3Q8N9W5 541 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 KCTD6Q8NC69 237 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 ZNF18P17022 549 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 MTA1Q13330 715 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 MED4Q9NPJ6 270 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 PGRMC1O00264 195 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 CYP21A2P08686 494 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 CCNYQ8ND76 341 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 MAP3K14Q99558 947 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 ZBTB18Q99592 522 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 KLC2Q9H0B6 622 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 EPS15L1Q9UBC2 864 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 hCG_1642624A0A1W2PR95 340 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 CCDC188H7C350 402 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 ATP8B1O43520 1251 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 TJP3O95049 919 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 PMLP29590 882 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 NR1H3Q13133 447 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 DCP1BQ8IZD4 617 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 TRIM54Q9BYV2 358 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 MRPL40Q9NQ50 206 aaKnown RBP12.86□□□□□ -0.35
NEK9-210ENST00000557026 MAD1L1Q9Y6D9 718 aa12.86□□□□□ -0.35
NEK9-210ENST00000557026 SYNGAP1Q96PV0 1343 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 STK25O00506 426 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 CD4P01730 458 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 EIF3BP55884 814 aaKnown RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 ARPP19P56211 112 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 SCRN1Q12765 414 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 FAM49AQ9H0Q0 323 aaPredicted RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 STMN1P16949 149 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 RNF180Q86T96 592 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 CENPKQ9BS16 269 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 DDX56Q9NY93 547 aaKnown RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 ORC6Q9Y5N6 252 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 SERPINB6P35237 376 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 CPT1AP50416 773 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 SPP2Q13103 211 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 SMAP1Q8IYB5 467 aaPredicted RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 FOPNLQ96NB1 174 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 TRIM31Q9BZY9 425 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 MRGBPQ9NV56 204 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 UBE4BO95155 1302 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 ZBED1O96006 694 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 KRT7P08729 469 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 ZNF280CQ8ND82 737 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 SPATA33Q96N06 139 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 WDR35Q9P2L0 1181 aa12.85□□□□□ -0.35
NEK9-210ENST00000557026 NXF1Q9UBU9 619 aaKnown RBP12.85□□□□□ -0.35
NEK9-210ENST00000557026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
NEK9-210ENST00000557026 SGK1O00141 431 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 CTNND1O60716 968 aaKnown RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 NFIXQ14938 502 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 PROSER3Q2NL68 480 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 ARRDC4Q8NCT1 418 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms