RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 ACOT7O00154 380 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 IGSF3O75054 1194 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 RAPGEF3O95398 923 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 CRTAMO95727 393 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 SRGAP2CP0DJJ0 459 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 EPHA5P54756 1037 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 PRKD1Q15139 912 aaPredicted RBP4.84□□□□□ -1.63
FOXN3-213ENST00000556916 C21orf62-AS1Q17RA5 79 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 MTDHQ86UE4 582 aaKnown RBP4.84□□□□□ -1.63
FOXN3-213ENST00000556916 JAZF1Q86VZ6 243 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 ZSWIM2Q8NEG5 633 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 NEIL1Q96FI4 390 aaPredicted RBP4.84□□□□□ -1.63
FOXN3-213ENST00000556916 MENTQ9BUN1 341 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 ZNF341Q9BYN7 854 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 PDGFDQ9GZP0 370 aaPredicted RBP4.84□□□□□ -1.63
FOXN3-213ENST00000556916 SLC39A2Q9NP94 309 aa4.84□□□□□ -1.63
FOXN3-213ENST00000556916 MRPL42Q9Y6G3 142 aaKnown RBP4.84□□□□□ -1.63
FOXN3-213ENST00000556916 CNTLNQ9NXG0 1405 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 TONSLQ96HA7 1378 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 FAM47E-STBD1D6RA91 191 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 KCNK3O14649 394 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 PYGMP11217 842 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 RRADP55042 308 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 RAC3P60763 192 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 GABREP78334 506 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 GUCY1A3Q02108 690 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 RNF207Q6ZRF8 634 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 MAMDC2Q7Z304 686 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-213ENST00000556916 TAX1BP1Q86VP1 789 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 PCDH19Q8TAB3 1148 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 SH3RF2Q8TEC5 729 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 ALG1Q9BT22 464 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 NCOA5Q9HCD5 579 aaKnown RBP4.83□□□□□ -1.64
FOXN3-213ENST00000556916 CBLCQ9ULV8 474 aa4.83□□□□□ -1.64
FOXN3-213ENST00000556916 RNF123Q5XPI4 1314 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 NPIPB8E9PQR5 432 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 COMTP21964 271 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 POLD1P28340 1107 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 TOP3AQ13472 1001 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-213ENST00000556916 ABHD17CQ6PCB6 329 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 BRAPQ7Z569 592 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 FUKQ8N0W3 1084 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 GSTCDQ8NEC7 633 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 SIN3AQ96ST3 1273 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 DPYSL5Q9BPU6 564 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 CARD11Q9BXL7 1154 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 SRPK3Q9UPE1 567 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 COQ6Q9Y2Z9 468 aa4.82□□□□□ -1.64
FOXN3-213ENST00000556916 LAS1LQ9Y4W2 734 aaKnown RBP4.82□□□□□ -1.64
FOXN3-213ENST00000556916 PRDM2Q13029 1718 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.81□□□□□ -1.64
FOXN3-213ENST00000556916 ARVCFO00192 962 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 AQP7O14520 342 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 ASMTLO95671 621 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 KCNA6P17658 529 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 DBPQ10586 325 aaPredicted RBP4.81□□□□□ -1.64
FOXN3-213ENST00000556916 PAK1Q13153 545 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 TKFCQ3LXA3 575 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 NRN1LQ496H8 165 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 USP39Q53GS9 565 aaKnown RBP4.81□□□□□ -1.64
FOXN3-213ENST00000556916 TRIM61Q5EBN2 209 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 OSTM1Q86WC4 334 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 RIC8BQ9NVN3 520 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 ARHGAP28Q9P2N2 729 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 SFMBT1Q9UHJ3 866 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 HECW1Q76N89 1606 aa4.81□□□□□ -1.64
FOXN3-213ENST00000556916 GCC2Q8IWJ2 1684 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
FOXN3-213ENST00000556916 CUTAO60888 179 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 RAD17O75943 681 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 ZNF202O95125 648 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 AMY2AP04746 511 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 PTPN1P18031 435 aaKnown RBP4.8□□□□□ -1.64
FOXN3-213ENST00000556916 AMY2BP19961 511 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 SDSP20132 328 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 ETV4P43268 484 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 DNM2P50570 870 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 JAM2P57087 298 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 FOXE3Q13461 319 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 FHL2Q14192 279 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 ZMAT1Q5H9K5 638 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 ZC3H12BQ5HYM0 836 aaKnown RBP4.8□□□□□ -1.64
FOXN3-213ENST00000556916 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 BTBD8Q5XKL5 378 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 GIMAP6Q6P9H5 292 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 FRAT1Q92837 279 aaPredicted RBP4.8□□□□□ -1.64
FOXN3-213ENST00000556916 OR14A2Q96R54 314 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 MRPL4Q9BYD3 311 aaKnown RBP4.8□□□□□ -1.64
FOXN3-213ENST00000556916 KIAA1683Q9H0B3 1180 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 CATSPERZQ9NTU4 200 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 FANCLQ9NW38 375 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 NUDCQ9Y266 331 aa4.8□□□□□ -1.64
FOXN3-213ENST00000556916 PRXQ9BXM0 1461 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms