RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SRGAP2CP0DJJ0 459 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 COL6A2P12110 1019 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 PABPC4Q13310 644 aaKnown RBP eCLIP7.26□□□□□ -1.258e-8■□□□□ 10.9
HIF1A-209ENST00000556827 TBC1D10BQ4KMP7 808 aaPredicted RBP7.26□□□□□ -1.25
HIF1A-209ENST00000556827 VASNQ6EMK4 673 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 TRMT10BQ6PF06 316 aaKnown RBP7.26□□□□□ -1.25
HIF1A-209ENST00000556827 C16orf86Q6ZW13 317 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 OTOP3Q7RTS5 596 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 TTLL11Q8NHH1 800 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 LOXL4Q96JB6 756 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 GPR20Q99678 358 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 FTSJ1Q9UET6 329 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 JAG2Q9Y219 1238 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 LTBP4Q8N2S1 1624 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 KIDINS220Q9ULH0 1771 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 SPATA31D1Q6ZQQ2 1576 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 ENPP3O14638 875 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 EFCAB14O75071 495 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 SDSP20132 328 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 MAGEA10P43363 369 aaPredicted RBP7.25□□□□□ -1.25
HIF1A-209ENST00000556827 MLLT6P55198 1093 aaPredicted RBP7.25□□□□□ -1.25
HIF1A-209ENST00000556827 TUSC3Q13454 348 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 TCEA2Q15560 299 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 PLEKHH3Q7Z736 793 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 RBM12BQ8IXT5 1001 aaKnown RBP7.25□□□□□ -1.25
HIF1A-209ENST00000556827 PCDH19Q8TAB3 1148 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 YTHDC1Q96MU7 727 aaKnown RBP7.25□□□□□ -1.25
HIF1A-209ENST00000556827 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
HIF1A-209ENST00000556827 A2ML1A8K2U0 1454 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 ARVCFO00192 962 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 PYGMP11217 842 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 PAK1Q13153 545 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 FNDC3BQ53EP0 1204 aaKnown RBP7.24□□□□□ -1.25
HIF1A-209ENST00000556827 GLB1LQ6UWU2 654 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 GGNQ86UU5 652 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 ZC3H7AQ8IWR0 971 aaKnown RBP7.24□□□□□ -1.25
HIF1A-209ENST00000556827 UHMK1Q8TAS1 419 aaKnown RBP7.24□□□□□ -1.25
HIF1A-209ENST00000556827 CLEC4DQ8WXI8 215 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 ZCCHC14Q8WYQ9 949 aaKnown RBP7.24□□□□□ -1.25
HIF1A-209ENST00000556827 MAGEB10Q96LZ2 347 aaPredicted RBP7.24□□□□□ -1.25
HIF1A-209ENST00000556827 RBM15Q96T37 977 aaKnown RBP eCLIP7.24□□□□□ -1.25
HIF1A-209ENST00000556827 MROH2AA6NES4 1674 aa7.24□□□□□ -1.25
HIF1A-209ENST00000556827 TCRBV16S1A1N1A0A5B0 115 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 NKRFO15226 690 aaKnown RBP eCLIP7.23□□□□□ -1.25
HIF1A-209ENST00000556827 LAMTOR5O43504 91 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 KCNQ2O43526 872 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 B4GALT3O60512 393 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 DNAJC8O75937 253 aaPredicted RBP7.23□□□□□ -1.25
HIF1A-209ENST00000556827 INSRRP14616 1297 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 SURF1Q15526 300 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 ABHD17CQ6PCB6 329 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 DHX37Q8IY37 1157 aaKnown RBP7.23□□□□□ -1.25
HIF1A-209ENST00000556827 DSEQ9UL01 958 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 WASF3Q9UPY6 502 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 COQ6Q9Y2Z9 468 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 CEP170BQ9Y4F5 1589 aaPredicted RBP7.23□□□□□ -1.25
HIF1A-209ENST00000556827 CDC42BPAQ5VT25 1732 aa7.23□□□□□ -1.25
HIF1A-209ENST00000556827 TCOF1Q13428 1488 aaKnown RBP7.23□□□□□ -1.25
HIF1A-209ENST00000556827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 SUPT6HQ7KZ85 1726 aaKnown RBP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 CEP162Q5TB80 1403 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 MIA2Q96PC5 1412 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 FBXO21O94952 628 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 LTFP02788 710 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 KCNA6P17658 529 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 HSPA1LP34931 641 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 DNM2P50570 870 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 ZNF460Q14592 562 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 ZXDCQ2QGD7 858 aaPredicted RBP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 PAN2Q504Q3 1202 aaKnown RBP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 PHF19Q5T6S3 580 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 C8orf49Q96NF6 230 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 SAMD11Q96NU1 681 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 BARX1Q9HBU1 254 aaPredicted RBP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 DLL4Q9NR61 685 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 HSPBP1Q9NZL4 362 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 CBLCQ9ULV8 474 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 TNPO3Q9Y5L0 923 aaKnown RBP7.22□□□□□ -1.25
HIF1A-209ENST00000556827 MBD5Q9P267 1494 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 FAM135AQ9P2D6 1515 aa7.22□□□□□ -1.25
HIF1A-209ENST00000556827 PLXNC1O60486 1568 aa7.21□□□□□ -1.25
HIF1A-209ENST00000556827 INO80Q9ULG1 1556 aaPredicted RBP7.21□□□□□ -1.25
HIF1A-209ENST00000556827 TCRBV5S4A2TA0A5A2 114 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 CKMP06732 381 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 FAHP16930 419 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 ADAM17P78536 824 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 PUM1Q14671 1186 aaKnown RBP eCLIP7.21□□□□□ -1.26
HIF1A-209ENST00000556827 DALRD3Q5D0E6 543 aaKnown RBP7.21□□□□□ -1.26
HIF1A-209ENST00000556827 KIAA0907Q7Z7F0 614 aaPredicted RBP7.21□□□□□ -1.26
HIF1A-209ENST00000556827 PROSER1Q86XN7 944 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 KBTBD2Q8IY47 623 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 DTX3Q8N9I9 347 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 CHST13Q8NET6 341 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 FBXW5Q969U6 566 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 JADE2Q9NQC1 790 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 CATSPERZQ9NTU4 200 aa7.21□□□□□ -1.26
HIF1A-209ENST00000556827 CCDC141Q6ZP82 1450 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms