RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 FAM161BQ96MY7 647 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 YBX2Q9Y2T7 364 aaKnown RBP25.31■■□□□ 1.64
PABPN1-206ENST00000556809 EVPLQ92817 2033 aa25.3■■□□□ 1.64
PABPN1-206ENST00000556809 SMIM35A0A1B0GVV1 85 aa25.3■■□□□ 1.64
PABPN1-206ENST00000556809 RPLP2P05387 115 aaKnown RBP25.3■■□□□ 1.64
PABPN1-206ENST00000556809 RABGGTBP53611 331 aa25.3■■□□□ 1.64
PABPN1-206ENST00000556809 RAB30Q15771 203 aa25.3■■□□□ 1.64
PABPN1-206ENST00000556809 RSPH3Q86UC2 560 aa25.3■■□□□ 1.64
PABPN1-206ENST00000556809 VAV3Q9UKW4 847 aa25.3■■□□□ 1.64
PABPN1-206ENST00000556809 KLRC1P26715 233 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 IKBKEQ14164 716 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 UGCGQ16739 394 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 MTMR9Q96QG7 549 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 TMEM60Q9H2L4 133 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 MSRAQ9UJ68 235 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 PCDHB6Q9Y5E3 794 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 PCDHA11Q9Y5I1 949 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 LOXHD1Q8IVV2 1947 aa25.29■■□□□ 1.64
PABPN1-206ENST00000556809 EFCAB14O75071 495 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 PDIA4P13667 645 aaKnown RBP25.28■■□□□ 1.64
PABPN1-206ENST00000556809 MRPS6P82932 125 aaKnown RBP25.28■■□□□ 1.64
PABPN1-206ENST00000556809 RESTQ13127 1097 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 PPP2R5CQ13362 524 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 MIER3Q7Z3K6 550 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 HERC6Q8IVU3 1022 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 CKAP2LQ8IYA6 745 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 FAM49AQ9H0Q0 323 aaPredicted RBP25.28■■□□□ 1.64
PABPN1-206ENST00000556809 ZNF576Q9H609 170 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 CDH23Q9H251 3354 aa25.28■■□□□ 1.64
PABPN1-206ENST00000556809 DEFB103AP81534 67 aa25.27■■□□□ 1.64
PABPN1-206ENST00000556809 FAM167AQ96KS9 214 aa25.27■■□□□ 1.64
PABPN1-206ENST00000556809 CDY2AQ9Y6F7 541 aa25.27■■□□□ 1.64
PABPN1-206ENST00000556809 EML1O00423 815 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 STBD1O95210 358 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 C22orf31O95567 290 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 OATP04181 439 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 OR52Z1P0C646 297 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 MYOGP15173 224 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 TXKP42681 527 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 KCNJ6P48051 423 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 LPIN1Q14693 890 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 FBXO47Q5MNV8 452 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 KIAA0319LQ8IZA0 1049 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 NME8Q8N427 588 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 SEPT8Q92599 483 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 CDX2Q99626 313 aaPredicted RBP25.26■■□□□ 1.63
PABPN1-206ENST00000556809 NKX2-4Q9H2Z4 354 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 TTC12Q9H892 705 aaPredicted RBP25.26■■□□□ 1.63
PABPN1-206ENST00000556809 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.26■■□□□ 1.63
PABPN1-206ENST00000556809 PCDHA12Q9UN75 941 aa25.26■■□□□ 1.63
PABPN1-206ENST00000556809 CHD9Q3L8U1 2897 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 PRKCEQ02156 737 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 SPIRE1Q08AE8 756 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 IER5Q5VY09 327 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 TRMT1LQ7Z2T5 733 aaKnown RBP25.25■■□□□ 1.63
PABPN1-206ENST00000556809 NRBP2Q9NSY0 501 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 CEP131Q9UPN4 1083 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 STXBP5LQ9Y2K9 1186 aa25.25■■□□□ 1.63
PABPN1-206ENST00000556809 KDM3AQ9Y4C1 1321 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 GHRP10912 638 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 TMEM62Q0P6H9 643 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 GRIN2CQ14957 1233 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.24■■□□□ 1.631e-8■■■■□ 26.3
PABPN1-206ENST00000556809 TMCO2Q7Z6W1 182 aaPredicted RBP25.24■■□□□ 1.63
PABPN1-206ENST00000556809 LINC01465Q8N7H1 131 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 C4orf32Q8N8J7 132 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 APBB2Q92870 758 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 IFIH1Q9BYX4 1025 aaKnown RBP25.24■■□□□ 1.63
PABPN1-206ENST00000556809 ZSCAN16Q9H4T2 348 aaPredicted RBP25.24■■□□□ 1.63
PABPN1-206ENST00000556809 SQORQ9Y6N5 450 aa25.24■■□□□ 1.63
PABPN1-206ENST00000556809 PTGDRQ13258 359 aa25.23■■□□□ 1.63
PABPN1-206ENST00000556809 TARBP2Q15633 366 aaKnown RBP25.23■■□□□ 1.63
PABPN1-206ENST00000556809 NCAPH2Q6IBW4 605 aa25.23■■□□□ 1.63
PABPN1-206ENST00000556809 NIFKQ9BYG3 293 aaKnown RBP25.23■■□□□ 1.63
PABPN1-206ENST00000556809 CELF4Q9BZC1 486 aaKnown RBP25.23■■□□□ 1.63
PABPN1-206ENST00000556809 TRPV2Q9Y5S1 764 aa25.23■■□□□ 1.63
PABPN1-206ENST00000556809 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-206ENST00000556809 LAD1O00515 517 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 GJB5O95377 273 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 XKR3Q5GH77 459 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 TSHZ1Q6ZSZ6 1077 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 BANK1Q8NDB2 785 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 CEP89Q96ST8 783 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 AGO3Q9H9G7 860 aaKnown RBP25.22■■□□□ 1.63
PABPN1-206ENST00000556809 SLC28A3Q9HAS3 691 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 MYH15Q9Y2K3 1946 aa25.22■■□□□ 1.63
PABPN1-206ENST00000556809 MAGEB2O15479 319 aa25.21■■□□□ 1.63
PABPN1-206ENST00000556809 CA3P07451 260 aa25.21■■□□□ 1.63
PABPN1-206ENST00000556809 ZSCAN22P10073 491 aaPredicted RBP25.21■■□□□ 1.63
PABPN1-206ENST00000556809 PKP1Q13835 747 aa25.21■■□□□ 1.63
PABPN1-206ENST00000556809 PSMC5P62195 406 aa25.2■■□□□ 1.62
PABPN1-206ENST00000556809 EPHA7Q15375 998 aa25.2■■□□□ 1.62
PABPN1-206ENST00000556809 FAM173BQ6P4H8 233 aa25.2■■□□□ 1.62
PABPN1-206ENST00000556809 USP38Q8NB14 1042 aa25.2■■□□□ 1.62
PABPN1-206ENST00000556809 CDHR5Q9HBB8 845 aa25.2■■□□□ 1.62
PABPN1-206ENST00000556809 WRAP73Q9P2S5 460 aaPredicted RBP25.2■■□□□ 1.62
PABPN1-206ENST00000556809 COL6A3P12111 3177 aa25.19■■□□□ 1.62
PABPN1-206ENST00000556809 TMEM150BA6NC51 233 aa25.19■■□□□ 1.62
PABPN1-206ENST00000556809 POTEMA6NI47 508 aa25.19■■□□□ 1.62
PABPN1-206ENST00000556809 M0QZ92 97 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms