RNA–Protein interactions for RNA: ENST00000556725.1

SYNE2-222, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-222ENST00000556725 TMEM266Q2M3C6 531 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 PCNX4Q63HM2 1172 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 SYCE2Q6PIF2 218 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 SEPT1Q8WYJ6 367 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 KRT23Q9C075 422 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 SMOC2Q9H3U7 446 aa9.96□□□□□ -0.82
SYNE2-222ENST00000556725 PTPRZ1P23471 2315 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-222ENST00000556725 MEIS2O14770 477 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 STAG3L1P0CL83 205 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 ARP10275 920 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 INSRRP14616 1297 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 TECP42680 631 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 NT5C2P49902 561 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 FOXK2Q01167 660 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 APOBRQ0VD83 1088 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 KCNC3Q14003 757 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 FAM102BQ5T8I3 360 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 IER5Q5VY09 327 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 LLGL2Q6P1M3 1020 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 TMEM105Q8N8V8 129 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 GLG1Q92896 1179 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 NEK1Q96PY6 1258 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 PCYT2Q99447 389 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 DSCC1Q9BVC3 393 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 IRF2BPLQ9H1B7 796 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 IL25Q9H293 177 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 ERAP1Q9NZ08 941 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 TRPV2Q9Y5S1 764 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 CACNA1HO95180 2353 aa9.95□□□□□ -0.82
SYNE2-222ENST00000556725 IGSF9BQ9UPX0 1349 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 PRR23AA6NEV1 266 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 TBKBP1A7MCY6 615 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-222ENST00000556725 FSCN2O14926 492 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 FGF18O76093 207 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 BRD1O95696 1058 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 ITGB5P18084 799 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 FOXK1P85037 733 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 TRAF1Q13077 416 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 SPOUT1Q5T280 376 aaKnown RBP9.94□□□□□ -0.82
SYNE2-222ENST00000556725 PLPP4Q5VZY2 271 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 ANKRD54Q6NXT1 300 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 TMEM184AQ6ZMB5 413 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 ZBTB33Q86T24 672 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 NLRX1Q86UT6 975 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 KREMEN2Q8NCW0 462 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 FTHL17Q9BXU8 183 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 CELF4Q9BZC1 486 aaKnown RBP9.94□□□□□ -0.82
SYNE2-222ENST00000556725 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 CNNM2Q9H8M5 875 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 TYW1Q9NV66 732 aaKnown RBP9.94□□□□□ -0.82
SYNE2-222ENST00000556725 TMEM260Q9NX78 707 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 LRFN2Q9ULH4 789 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 PCDHB7Q9Y5E2 793 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 PCDHB12Q9Y5F1 795 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 SQORQ9Y6N5 450 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 DMXL1Q9Y485 3027 aa9.94□□□□□ -0.82
SYNE2-222ENST00000556725 FRYLO94915 3013 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 RRN3P2A6NIE6 340 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 HIDE1A8MVS5 230 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 NBL1P41271 181 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 SARSP49591 514 aaKnown RBP9.93□□□□□ -0.82
SYNE2-222ENST00000556725 UBE3AQ05086 875 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 TROAPQ12815 778 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
SYNE2-222ENST00000556725 PAK2Q13177 524 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 COLGALT1Q8NBJ5 622 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 GIMAP8Q8ND71 665 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-222ENST00000556725 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 CDCA3Q99618 268 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-222ENST00000556725 CWH43Q9H720 699 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 DIAPH3Q9NSV4 1193 aa9.93□□□□□ -0.82
SYNE2-222ENST00000556725 C2CD4DB7Z1M9 353 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 M0QZ92 97 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 IFIT3O14879 490 aaKnown RBP9.92□□□□□ -0.82
SYNE2-222ENST00000556725 PLCB4Q15147 1175 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 KANK3Q6NY19 840 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 LRRC55Q6ZSA7 311 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 THNSL1Q8IYQ7 743 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 CUL5Q93034 780 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 ADAM2Q99965 735 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 POMKQ9H5K3 350 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 ERVK-5Q9HDB9 667 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 GINS2Q9Y248 185 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 NOC2LQ9Y3T9 749 aaKnown RBP9.92□□□□□ -0.82
SYNE2-222ENST00000556725 PCDHA2Q9Y5H9 948 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 UBIAD1Q9Y5Z9 338 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 TAF6LQ9Y6J9 622 aa9.92□□□□□ -0.82
SYNE2-222ENST00000556725 EVPLQ92817 2033 aa9.91□□□□□ -0.82
SYNE2-222ENST00000556725 C9IYK1 514 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms