RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 HOXC13P31276 330 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 RPS6P62753 249 aaKnown RBP5.02□□□□□ -1.61
ATXN3-242ENST00000556644 ARHGAP4P98171 946 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 SCAPQ12770 1279 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 RALBP1Q15311 655 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 FAM26DQ5JW98 314 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 FBXO47Q5MNV8 452 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 ZBTB41Q5SVQ8 909 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 C12orf60Q5U649 245 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 SYDE2Q5VT97 1194 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 RNF207Q6ZRF8 634 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 CEP68Q76N32 757 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 TRIM50Q86XT4 487 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 ZNF843Q8N446 348 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 MRPL43Q8N983 215 aaKnown RBP5.02□□□□□ -1.61
ATXN3-242ENST00000556644 TMEM87AQ8NBN3 555 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 DEFB124Q8NES8 71 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 PPTC7Q8NI37 304 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 STAG1Q8WVM7 1258 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 C16orf70Q9BSU1 422 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 DDX23Q9BUQ8 820 aaKnown RBP5.02□□□□□ -1.61
ATXN3-242ENST00000556644 EDEM2Q9BV94 578 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 FAM126AQ9BYI3 521 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-242ENST00000556644 CWH43Q9H720 699 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 SFXN1Q9H9B4 322 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 SLC2A4RGQ9NR83 387 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 FAM217BQ9NTX9 383 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-242ENST00000556644 PRR12Q9ULL5 1215 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 LZTS1Q9Y250 596 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 MSRB2Q9Y3D2 182 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 KALRNO60229 2985 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 ZNF532Q9HCE3 1301 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 FREM2Q5SZK8 3169 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 FOXD2O60548 495 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 PRDM1O75626 825 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 MBD4O95243 580 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CXCL14O95715 111 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CAPNS1P04632 268 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 ICAM1P05362 532 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 ZNF806P0C7X5 589 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 FDX1P10109 184 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 LAG3P18627 525 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 HOXC8P31273 242 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 SLC1A4P43007 532 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 RARSP54136 660 aaKnown RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 HNRNPUQ00839 825 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 SATB1Q01826 763 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 PLCB3Q01970 1234 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 MGAT3Q09327 533 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 TMEM62Q0P6H9 643 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 HTR4Q13639 388 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 TMEM266Q2M3C6 531 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 HSDL1Q3SXM5 330 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 SLC44A4Q53GD3 710 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 TNNI3KQ59H18 835 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 TSHZ1Q6ZSZ6 1077 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 TPRG1Q6ZUI0 275 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 GET4Q7L5D6 327 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 FAM160B2Q86V87 743 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 MRPL50Q8N5N7 158 aaKnown RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 SLC22A17Q8WUG5 538 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CHURC1Q8WUH1 139 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 LMBR1Q8WVP7 490 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CLEC4DQ8WXI8 215 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 GLG1Q92896 1179 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 ZBTB10Q96DT7 871 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CEP95Q96GE4 821 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 SPATA33Q96N06 139 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 MPHOSPH6Q99547 160 aaKnown RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 MEIS3Q99687 375 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 EPS15L1Q9UBC2 864 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 NDRG2Q9UN36 371 aaKnown RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 RBM19Q9Y4C8 960 aaKnown RBP5.01□□□□□ -1.61
ATXN3-242ENST00000556644 MRVI1Q9Y6F6 885 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CDY2AQ9Y6F7 541 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 FPGT-TNNI3KV9GXZ4 949 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 ACACAQ13085 2346 aa5.01□□□□□ -1.61
ATXN3-242ENST00000556644 CLUHO75153 1309 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 NRCAMQ92823 1304 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 CACNA1EQ15878 2313 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 GREB1Q4ZG55 1949 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 LOC102724159A0A0B4J2E5 919 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 IGKV6D-41A0A0C4DH26 115 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 SPAARA0A1B0GVQ0 90 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 NT5C1B-RDH14C9J2C7 533 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 H3BRB1 525 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 MGEA5O60502 916 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 GGPS1O95749 300 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 LGALS2P05162 132 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 SLC16A2P36021 539 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 NRLP54845 237 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 KRT17Q04695 432 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 G3BP1Q13283 466 aaKnown RBP eCLIP5□□□□□ -1.61
ATXN3-242ENST00000556644 LAMC2Q13753 1193 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 WTAPQ15007 396 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 PWP2Q15269 919 aaKnown RBP5□□□□□ -1.61
ATXN3-242ENST00000556644 CCDC96Q2M329 555 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 SLC9C2Q5TAH2 1124 aa5□□□□□ -1.61
ATXN3-242ENST00000556644 TTBK2Q6IQ55 1244 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms