RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 BANK1Q8NDB2 785 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 CRYGNQ8WXF5 182 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 SLKQ9H2G2 1235 aaPredicted RBP11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 DISC1Q9NRI5 854 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 PCDHA4Q9UN74 947 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 CEP131Q9UPN4 1083 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 AKT3Q9Y243 479 aa11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 MAFBQ9Y5Q3 323 aaPredicted RBP11.96□□□□□ -0.49
SPTLC2-205ENST00000556607 KIAA1671Q9BY89 1806 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 GPR182O15218 404 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 MSH4O15457 936 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 DGKIO75912 1065 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 VTNP04004 478 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 KCNA5P22460 613 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 TMOD1P28289 359 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 BMPR1AP36894 532 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 USP11P51784 963 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 KIZQ2M2Z5 673 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 TIGD5Q53EQ6 642 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 LRCH2Q5VUJ6 765 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 EFCAB12Q6NXP0 572 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 RTN4RL1Q86UN2 441 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 NPAS4Q8IUM7 802 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 BLIDQ8IZY5 108 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 GJA10Q969M2 543 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 FAM167AQ96KS9 214 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 SCLT1Q96NL6 688 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 OSMRQ99650 979 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 UBE2ZQ9H832 354 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 NRBP2Q9NSY0 501 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 NOC2LQ9Y3T9 749 aaKnown RBP11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 PCDHB7Q9Y5E2 793 aa11.95□□□□□ -0.5
SPTLC2-205ENST00000556607 TTC3P53804 2025 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 CDKL5O76039 1030 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 C22orf31O95567 290 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 RB1P06400 928 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 XBP1P17861 261 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 CLCN3P51790 818 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 TCEAL5Q5H9L2 206 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 MIER3Q7Z3K6 550 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 LINC01599Q8WXQ3 324 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 ZNF689Q96CS4 500 aaPredicted RBP11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 AIFM3Q96NN9 605 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 ADAM2Q99965 735 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 NSUN3Q9H649 340 aaKnown RBP11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 CLDND1Q9NY35 253 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 COL4A6Q14031 1691 aa11.94□□□□□ -0.5
SPTLC2-205ENST00000556607 CCDC194A0A1B0GVG4 234 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 C5orf67F2Z3F1 127 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 MAGEB2O15479 319 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 MARCH6O60337 910 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 TDP2O95551 362 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 OATP04181 439 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 SFNP31947 248 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 JAK3P52333 1124 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 CRYBB1P53674 252 aaPredicted RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 CMTR2Q8IYT2 770 aaKnown RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 LRRC71Q8N4P6 559 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 LENG9Q96B70 501 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 ZNF668Q96K58 619 aaPredicted RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 RIT2Q99578 217 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 UNC45AQ9H3U1 944 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 IGFLR1Q9H665 355 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 ERVK-5Q9HDB9 667 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 ALG13Q9NP73 1137 aaKnown RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 ST3GAL5Q9UNP4 418 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 KCNJ14Q9UNX9 436 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 MRPL42Q9Y6G3 142 aaKnown RBP11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 ATG2AQ2TAZ0 1938 aa11.93□□□□□ -0.5
SPTLC2-205ENST00000556607 VCANP13611 3396 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 FNDC1Q4ZHG4 1894 aaPredicted RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 TBKBP1A7MCY6 615 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 ZBTB42B2RXF5 422 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 H3BQ06 376 aaPredicted RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 GRM6O15303 877 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 MGEA5O60502 916 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 DTNBO60941 627 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 ZSCAN20P17040 1043 aaPredicted RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 SARSP49591 514 aaKnown RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 GATMP50440 423 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 PRKCEQ02156 737 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 TBC1D8BQ0IIM8 1120 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 SCRN1Q12765 414 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 INF2Q27J81 1249 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 LETM2Q2VYF4 491 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms