RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 B2MP61769 119 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 GPSM2P81274 684 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 TMF1P82094 1093 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 PDE1BQ01064 536 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 UBXN1Q04323 297 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 PAK2Q13177 524 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 TUBB8Q3ZCM7 444 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 METTL24Q5JXM2 366 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ZBTB41Q5SVQ8 909 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 MEI1Q5TIA1 1274 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ZNF746Q6NUN9 644 aaPredicted RBP6.78□□□□□ -1.32
TDP1-215ENST00000556498 NEPROQ6NW34 567 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 MIS18BP1Q6P0N0 1132 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 CORO6Q6QEF8 472 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ANGPTL8Q6UXH0 198 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 TMEM151BQ8IW70 566 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 CCDC83Q8IWF9 413 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 TMCO5AQ8N6Q1 288 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 CCDC148Q8NFR7 591 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ZNF417Q8TAU3 575 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 OSBP2Q969R2 916 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 GIMAP5Q96F15 307 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ALPK1Q96QP1 1244 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ZNF587Q96SQ5 575 aaPredicted RBP6.78□□□□□ -1.32
TDP1-215ENST00000556498 USP26Q9BXU7 913 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 TRPV6Q9H1D0 765 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 SERHL2Q9H4I8 314 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
TDP1-215ENST00000556498 AASDHPPTQ9NRN7 309 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 PLEKHH1Q9ULM0 1364 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 CEP164Q9UPV0 1460 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 SH3TC1Q8TE82 1336 aa6.77□□□□□ -1.32
TDP1-215ENST00000556498 YEATS2Q9ULM3 1422 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 LILRB5O75023 590 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 BPNT1O95861 308 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 GZMAP12544 262 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 KRT4P19013 534 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 PSMA4P25789 261 aaKnown RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 MLH1P40692 756 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 ARHGAP25P42331 645 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 LMAN1P49257 510 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 SCNN1BP51168 640 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 AFF1P51825 1210 aaKnown RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 GABREP78334 506 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 PLIN5Q00G26 463 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 AKAP17AQ02040 695 aaKnown RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 GUCY1B3Q02153 619 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 RELQ04864 619 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 HSPA14Q0VDF9 509 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 PPP1R7Q15435 360 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 MAPRE2Q15555 327 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 WHAMMP3Q1A5X7 153 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 CAVIN4Q5BKX8 364 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 RPS26P11Q5JNZ5 115 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 SLC10A5Q5PT55 438 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 BEND6Q5SZJ8 279 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 GDF6Q6KF10 455 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 CCDC62Q6P9F0 684 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 LRSAM1Q6UWE0 723 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 B4GALNT4Q76KP1 1039 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 JAZF1Q86VZ6 243 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 IFNL3Q8IZI9 196 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 SYCP3Q8IZU3 236 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 AADATQ8N5Z0 425 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 MDM1Q8TC05 714 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 IFT81Q8WYA0 676 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 NELL1Q92832 810 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 ATP6V1E2Q96A05 226 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 OPTNQ96CV9 577 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 CENPOQ9BU64 300 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 SELENOOQ9BVL4 669 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 MOV10L1Q9BXT6 1211 aaKnown RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 DNAJC18Q9H819 358 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 PRDM6Q9NQX0 595 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 SH2B1Q9NRF2 756 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 METTL5Q9NRN9 209 aaKnown RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 PRKAG2Q9UGJ0 569 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 ADAM21Q9UKJ8 722 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 PNMA8BQ9ULN7 279 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 PPM1HQ9ULR3 514 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 ZMYND8Q9ULU4 1186 aaPredicted RBP6.77□□□□□ -1.33
TDP1-215ENST00000556498 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 AATKQ6ZMQ8 1374 aa6.77□□□□□ -1.33
TDP1-215ENST00000556498 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 HTR3EA5X5Y0 456 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 RASSF10A6NK89 507 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 CETN3O15182 167 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 CYP27B1O15528 508 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 RASA4O43374 803 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 KCNJ13O60928 360 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 SMIM24O75264 130 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 URI1O94763 535 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms