RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 A0A0G2JLL6 359 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 A0A1W2PQ27 194 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 A0A1W2PQ64 194 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 A0A1W2PQC6 194 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 A0A1W2PQD8 194 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 CD247P20963 164 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 IGFBP6P24592 240 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 GALK1P51570 392 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 MVKQ03426 396 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 TCEAL1Q15170 157 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 MTHFSDQ2M296 383 aaKnown RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 KRT24Q2M2I5 525 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 HSP90AB2PQ58FF8 381 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 NOL9Q5SY16 702 aaKnown RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 ZPBP2Q6X784 338 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 NOL8Q76FK4 1167 aaKnown RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 USP48Q86UV5 1035 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 ERC1Q8IUD2 1116 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 ZGPATQ8N5A5 531 aaKnown RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 C19orf47Q8N9M1 422 aaKnown RBP5.2□□□□□ -1.58
ATXN3-241ENST00000556374 FAM184AQ8NB25 1140 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 SMC1BQ8NDV3 1235 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 OR6P1Q8NGX9 317 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 RNF34Q969K3 372 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 KIF1BPQ96EK5 621 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 ABHD8Q96I13 439 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 TMX3Q96JJ7 454 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 TEPSINQ96N21 525 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 FERD3LQ96RJ6 166 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 GP6Q9HCN6 339 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 PDLIM7Q9NR12 457 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 LMBRD1Q9NUN5 540 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 JAG2Q9Y219 1238 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 C4BP0C0L5 1744 aa5.2□□□□□ -1.58
ATXN3-241ENST00000556374 SYCE3A1L190 88 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 C9IYK1 514 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 HIP1O00291 1037 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 FOXN1O15353 648 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 BUB1BO60566 1050 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-241ENST00000556374 HOXB7P09629 217 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 ITGA4P13612 1032 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 ZNF16P17020 682 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-241ENST00000556374 CHMLP26374 656 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 KCNJ4P48050 445 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 TERF1P54274 439 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 EPHB3P54753 998 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 ATP8B2P98198 1209 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 FANCCQ00597 558 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 KIAA2012Q0VF49 1180 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 TEFQ10587 303 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 CUL4AQ13619 759 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 CCDC183Q5T5S1 534 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 RCSD1Q6JBY9 416 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 CRTC3Q6UUV7 619 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 RPTNQ6XPR3 784 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 DBX2Q6ZNG2 339 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 TMC6Q7Z403 805 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 FRMD5Q7Z6J6 570 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 MTERF4Q7Z6M4 381 aaKnown RBP5.19□□□□□ -1.58
ATXN3-241ENST00000556374 GAS2L3Q86XJ1 694 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 JAMLQ86YT9 394 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 NAT16Q8N8M0 369 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 OTUD7AQ8TE49 926 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-241ENST00000556374 BORCS6Q96GS4 357 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 JMJD8Q96S16 334 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 IMPACTQ9P2X3 320 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 ZNF214Q9UL59 606 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-241ENST00000556374 SMC3Q9UQE7 1217 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 LRRFIP2Q9Y608 721 aaKnown RBP5.19□□□□□ -1.58
ATXN3-241ENST00000556374 TTC41PQ6P2S7 1318 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 RAD50Q92878 1312 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 THSD7BQ9C0I4 1608 aa5.19□□□□□ -1.58
ATXN3-241ENST00000556374 NFAT5O94916 1531 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 TRBV23OR9-2A0A075B6M9 112 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 ZBTB7CA1YPR0 619 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 GOLGA6L6A8MZA4 724 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 OFD1O75665 1012 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 SURF6O75683 361 aaKnown RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 GLRX3O76003 335 aaKnown RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 GCP02774 474 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 TPM3P06753 285 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 GSTM1P09488 218 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 HOXC9P31274 260 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 RGS19P49795 217 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 CHAF1AQ13111 956 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 TAF7Q15545 349 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 PLEKHN1Q494U1 663 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 C1orf141Q5JVX7 400 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 DNTTIP2Q5QJE6 756 aaKnown RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 ZFYVE27Q5T4F4 411 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 EEF1DP3Q658K8 133 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 CLASRPQ8N2M8 674 aaKnown RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 PHAXQ9H814 394 aaKnown RBP5.18□□□□□ -1.58
ATXN3-241ENST00000556374 MINPP1Q9UNW1 487 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 ZKSCAN5Q9Y2L8 839 aa5.18□□□□□ -1.58
ATXN3-241ENST00000556374 TNRC18O15417 2968 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 EXOC5O00471 708 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms