RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 RRP36Q96EU6 259 aaKnown RBP12.31□□□□□ -0.44
SYNE2-221ENST00000556342 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 IGFLR1Q9H665 355 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 CD207Q9UJ71 328 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 PLAGL2Q9UPG8 496 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 E7EWF7 191 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 STXBP3O00186 592 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
SYNE2-221ENST00000556342 ITGB5P18084 799 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 ANTXR2P58335 489 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 MRPS6P82932 125 aaKnown RBP12.3□□□□□ -0.44
SYNE2-221ENST00000556342 ADAM15Q13444 863 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 CRIPAKQ8N1N5 446 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 GLG1Q92896 1179 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 P2RX5Q93086 422 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 PPP2R3CQ969Q6 453 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 MSLNLQ96KJ4 702 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 MFSD14AQ96MC6 490 aa12.3□□□□□ -0.44
SYNE2-221ENST00000556342 AGO3Q9H9G7 860 aaKnown RBP12.3□□□□□ -0.44
SYNE2-221ENST00000556342 MRPL42Q9Y6G3 142 aaKnown RBP12.3□□□□□ -0.44
SYNE2-221ENST00000556342 TTC3P53804 2025 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 DDAH1O94760 285 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 EYA4O95677 639 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
SYNE2-221ENST00000556342 ITGB1P05556 798 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 DNAJB1P25685 340 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 SMARCA1P28370 1054 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 CD52P31358 61 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 KIF5BP33176 963 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 NDUFV1P49821 464 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 IGBP1P78318 339 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 ADGRD2Q7Z7M1 963 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 RTN4RL1Q86UN2 441 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-221ENST00000556342 NPAS4Q8IUM7 802 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
SYNE2-221ENST00000556342 ZNF654Q8IZM8 581 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 CTCFLQ8NI51 663 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-221ENST00000556342 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 EDAQ92838 391 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 ZBTB10Q96DT7 871 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 MAP3K14Q99558 947 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 MYL10Q9BUA6 226 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-221ENST00000556342 SMARCAD1Q9H4L7 1026 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 SEC63Q9UGP8 760 aaKnown RBP12.29□□□□□ -0.44
SYNE2-221ENST00000556342 SQORQ9Y6N5 450 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 TECTAO75443 2155 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 ATG2AQ2TAZ0 1938 aa12.29□□□□□ -0.44
SYNE2-221ENST00000556342 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 INSRRP14616 1297 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 MTMR1Q13613 665 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 IER5Q5VY09 327 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-221ENST00000556342 EFHBQ8N7U6 833 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 SPPL3Q8TCT6 385 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 PCYT2Q99447 389 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 LZTS2Q9BRK4 669 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 FTHL17Q9BXU8 183 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 PSTPIP2Q9H939 334 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 TRPV2Q9Y5S1 764 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 UBIAD1Q9Y5Z9 338 aa12.28□□□□□ -0.44
SYNE2-221ENST00000556342 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 STAG3L1P0CL83 205 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 CHMLP26374 656 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 UBE2SQ16763 222 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 PAN2Q504Q3 1202 aaKnown RBP12.27□□□□□ -0.45
SYNE2-221ENST00000556342 BMP8AQ7Z5Y6 402 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 KLHL23Q8NBE8 558 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 POF1BQ8WVV4 589 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 JPH1Q9HDC5 661 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-221ENST00000556342 JADE2Q9NQC1 790 aa12.27□□□□□ -0.45
SYNE2-221ENST00000556342 TMEM221A6NGB7 291 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 SPDYE3A6NKU9 549 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 M0QZ92 97 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 M0R296 226 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 MAFGO15525 162 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 SCG2P13521 617 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 NRIP1P48552 1158 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 GNAQP50148 359 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 TMEM62Q0P6H9 643 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 COASYQ13057 564 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 PAK2Q13177 524 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 TRIM67Q6ZTA4 783 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
SYNE2-221ENST00000556342 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
SYNE2-221ENST00000556342 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
SYNE2-221ENST00000556342 AZI2Q9H6S1 392 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms