RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NOL10Q9BSC4 688 aaKnown RBP5.91□□□□□ -1.46
ATXN3-239ENST00000556315 CEP44Q9C0F1 390 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 TMEM39AQ9NV64 488 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 HOXC10Q9NYD6 342 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 RAI14Q9P0K7 980 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ZBTB21Q9ULJ3 1066 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 PTPRCP08575 1304 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 DCDC2CA8MYV0 355 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 DYNC1LI2O43237 492 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-239ENST00000556315 CTSHP09668 335 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 TSNAXIP1Q2TAA8 658 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 PRAMEF19Q5SWL8 479 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 ANO1Q5XXA6 986 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 CCDC174Q6PII3 467 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 OGFOD3Q6PK18 319 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 RNF180Q86T96 592 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 SPATA5Q8NB90 893 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 FLCNQ8NFG4 579 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-239ENST00000556315 TOX2Q96NM4 488 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 RAD18Q9NS91 495 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 HMG20BQ9P0W2 317 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 BTBD7Q9P203 1132 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 KIAA1522Q9P206 1035 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-239ENST00000556315 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 NRBP1Q9UHY1 535 aa5.9□□□□□ -1.46
ATXN3-239ENST00000556315 TTC28Q96AY4 2481 aa5.9□□□□□ -1.47
ATXN3-239ENST00000556315 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 DDX60LQ5H9U9 1706 aaKnown RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 A0A1B0GUL7 405 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 PQBP1O60828 265 aaKnown RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 IGSF3O75054 1194 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 RECKO95980 971 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 TIMP1P01033 207 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 GH2P01242 217 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 UBTFL1P0CB47 393 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 RARBP10826 455 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 ADORA2AP29274 412 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 PPP2R3AQ06190 1150 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 COG2Q14746 738 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 CCDC85BQ15834 202 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 CCDC184Q52MB2 194 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 GORABQ5T7V8 394 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 CCDC129Q6ZRS4 1044 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 ANKRD33Q7Z3H0 272 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 WFDC3Q8IUB2 231 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 ABRAQ8N0Z2 381 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 POU5F2Q8N7G0 328 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 TMEM87AQ8NBN3 555 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 SLC44A5Q8NCS7 719 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 SHCBP1Q8NEM2 672 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 TGFBRAP1Q8WUH2 860 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 NEUROD6Q96NK8 337 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 FEZ1Q99689 392 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 MOV10L1Q9BXT6 1211 aaKnown RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 BACH2Q9BYV9 841 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 MROH8Q9H579 483 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 DNAJC18Q9H819 358 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 LRRC4CQ9HCJ2 640 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 GPN3Q9UHW5 284 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 AP4E1Q9UPM8 1137 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
ATXN3-239ENST00000556315 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
ATXN3-239ENST00000556315 MGAMO43451 1857 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 VCAM1P19320 739 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 FAAP100Q0VG06 881 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 TFCP2Q12800 502 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 AP3B2Q13367 1082 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 RAB30Q15771 203 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 ZYXQ15942 572 aaKnown RBP5.88□□□□□ -1.47
ATXN3-239ENST00000556315 SHROOM1Q2M3G4 852 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-239ENST00000556315 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 RASIP1Q5U651 963 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 NAA16Q6N069 864 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-239ENST00000556315 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 SV2BQ7L1I2 683 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 BCL7CQ8WUZ0 217 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-239ENST00000556315 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-239ENST00000556315 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-239ENST00000556315 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
ATXN3-239ENST00000556315 PPP1R9AQ9ULJ8 1098 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms