RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 FAM167AQ96KS9 214 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 TRMT13Q9NUP7 481 aaKnown RBP12.81□□□□□ -0.36
GABRB3-210ENST00000556166 SEPT9Q9UHD8 586 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-210ENST00000556166 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 SCN10AQ9Y5Y9 1956 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 MBLAC1A4D2B0 266 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-210ENST00000556166 TREHO43280 583 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 DKC1O60832 514 aaKnown RBP eCLIP12.81□□□□□ -0.36
GABRB3-210ENST00000556166 PFKFB1P16118 471 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 KLRC1P26715 233 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 RARRES1P49788 294 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 NDUFA8P51970 172 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-210ENST00000556166 TRIM60Q495X7 471 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 FAM47CQ5HY64 1035 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 ZNF484Q5JVG2 852 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 FSIP1Q8NA03 581 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 WNT8BQ93098 351 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 CEP170P1Q96L14 293 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 CYP26B1Q9NR63 512 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 LMBRD1Q9NUN5 540 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 DBR1Q9UK59 544 aaKnown RBP12.81□□□□□ -0.36
GABRB3-210ENST00000556166 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 NRCAMQ92823 1304 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 C17orf102A2RUQ5 167 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 RRN3P2A6NIE6 340 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 POLR2DO15514 142 aaKnown RBP12.8□□□□□ -0.36
GABRB3-210ENST00000556166 B4GALT4O60513 344 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 C22orf31O95567 290 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 EYA4O95677 639 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 CD4P01730 458 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 TLE2Q04725 743 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 PTPN11Q06124 597 aaPredicted RBP12.8□□□□□ -0.36
GABRB3-210ENST00000556166 MCM6Q14566 821 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 XKR9Q5GH70 373 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 MTHFD1LQ6UB35 978 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 OTUD6AQ7L8S5 288 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 ANKRD33Q7Z3H0 272 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 RAD54LQ92698 747 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 MTRQ99707 1265 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 BHMT2Q9H2M3 363 aa12.8□□□□□ -0.36
GABRB3-210ENST00000556166 KDM3AQ9Y4C1 1321 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 IGKV6-21A0A0C4DH24 114 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 LIG1P18858 919 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 RTP1P59025 263 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 DRP2Q13474 957 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
GABRB3-210ENST00000556166 PTGISQ16647 500 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 LONRF3Q496Y0 759 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 ARSHQ5FYA8 562 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
GABRB3-210ENST00000556166 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
GABRB3-210ENST00000556166 DHX58Q96C10 678 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 CDK5RAP3Q96JB5 506 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 NT5C3AQ9H0P0 336 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 POLD4Q9HCU8 107 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 XPNPEP1Q9NQW7 623 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 FAM13BQ9NYF5 915 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 CCDC39Q9UFE4 941 aa12.79□□□□□ -0.36
GABRB3-210ENST00000556166 COL1A2P08123 1366 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 MAFO75444 373 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 CYP2C9P11712 490 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 TXLNAP40222 546 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 FAAP100Q0VG06 881 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 TRIM71Q2Q1W2 868 aaKnown RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 CCDC73Q6ZRK6 1079 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 C1orf186Q6ZWK4 172 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 SERINC5Q86VE9 423 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 FMR1NBQ8N0W7 255 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 TOX2Q96NM4 488 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 RUSC1Q9BVN2 902 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 DHX33Q9H6R0 707 aaKnown RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-210ENST00000556166 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 SERTAD1Q9UHV2 236 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 PCDHA2Q9Y5H9 948 aa12.78□□□□□ -0.36
GABRB3-210ENST00000556166 NPHP3-ACAD11A0A0J9YXS1 232 aa12.77□□□□□ -0.36
GABRB3-210ENST00000556166 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.36
GABRB3-210ENST00000556166 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms