RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 SAMD11Q96NU1 681 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 ZMYND12Q9H0C1 365 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 PXMP2Q9NR77 195 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 ZNF318Q5VUA4 2279 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 SYCE3A1L190 88 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 H3BNC9 293 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 LAD1O00515 517 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 TREHO43280 583 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 NR3C2P08235 984 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 HTRA4P83105 476 aaPredicted RBP12.49□□□□□ -0.41
CHGA-205ENST00000556098 SP4Q02446 784 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 PTPAQ15257 358 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 HSDL1Q3SXM5 330 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 ADHFE1Q8IWW8 467 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
CHGA-205ENST00000556098 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 PCDHA7Q9UN72 937 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 KCNJ14Q9UNX9 436 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 MRPL11Q9Y3B7 192 aaKnown RBP12.49□□□□□ -0.41
CHGA-205ENST00000556098 WDFY4Q6ZS81 3184 aa12.49□□□□□ -0.41
CHGA-205ENST00000556098 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 STXBP3O00186 592 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 HAS3O00219 553 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 CYTH3O43739 400 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 DTNBO60941 627 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 EIF3JO75822 258 aaKnown RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 SMIM10L2AP0DMW4 78 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 SMIM10L2BP0DMW5 78 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 HOXA13P31271 388 aaPredicted RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHGA-205ENST00000556098 NDUFV1P49821 464 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 PLEKHG4Q58EX7 1191 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 ARL6IP4Q66PJ3 421 aaKnown RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 CMTR1Q8N1G2 835 aaKnown RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 FSIP1Q8NA03 581 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 GPKOWQ92917 476 aaPredicted RBP eCLIP12.48□□□□□ -0.41
CHGA-205ENST00000556098 MTMR8Q96EF0 704 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 NAP1L4Q99733 375 aaKnown RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 OSBPL7Q9BZF2 842 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 DACT1Q9NYF0 836 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 HOOK1Q9UJC3 728 aaKnown RBP12.48□□□□□ -0.41
CHGA-205ENST00000556098 CLIC4Q9Y696 253 aa12.48□□□□□ -0.41
CHGA-205ENST00000556098 FNDC1Q4ZHG4 1894 aaPredicted RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 CCDC194A0A1B0GVG4 234 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 GRM6O15303 877 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 LINC01565O15544 149 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 MBTPS2O43462 519 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 NAPAP54920 295 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 CEBPZQ03701 1054 aaKnown RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 DLX2Q07687 328 aaPredicted RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 NPY5RQ15761 445 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 CELF3Q5SZQ8 465 aaKnown RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 UTP14CQ5TAP6 766 aaKnown RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 SERINC5Q86VE9 423 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 HOMER1Q86YM7 354 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 ENGASEQ8NFI3 743 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 SNX27Q96L92 541 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 POP1Q99575 1024 aaKnown RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 FAM86C1Q9NVL1 165 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 PRKAG3Q9UGI9 489 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
CHGA-205ENST00000556098 SRPRBQ9Y5M8 271 aaKnown RBP12.47□□□□□ -0.41
CHGA-205ENST00000556098 EVPLQ92817 2033 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.46□□□□□ -0.41
CHGA-205ENST00000556098 POTEB3A0JP26 581 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 H3BRB1 525 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 M0R2N6 131 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 ZBTB5O15062 677 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 LIG1P18858 919 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 UBA1P22314 1058 aaKnown RBP12.46□□□□□ -0.41
CHGA-205ENST00000556098 ARHGAP4P98171 946 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 HYAL1Q12794 435 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 NR5A1Q13285 461 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 TTC38Q5R3I4 469 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 AXDND1Q5T1B0 1012 aaPredicted RBP12.46□□□□□ -0.41
CHGA-205ENST00000556098 RESP18Q5W5W9 173 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 KANK3Q6NY19 840 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms