RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 HIRAP54198 1017 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-235ENST00000556082 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-235ENST00000556082 PPP2R5CQ13362 524 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KCNJ12Q14500 433 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KRT31Q15323 416 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 WDR44Q5JSH3 913 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 XRRA1Q6P2D8 792 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 CCDC174Q6PII3 467 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 OTOP1Q7RTM1 612 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KRT26Q7Z3Y9 468 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KCNK18Q7Z418 384 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 CATSPER3Q86XQ3 398 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 FAM114A1Q8IWE2 563 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 SYT2Q8N9I0 419 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-235ENST00000556082 TBC1D5Q92609 795 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KLRG1Q96E93 195 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 CCDC51Q96ER9 411 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 PANX2Q96RD6 677 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 RIT2Q99578 217 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 DUSP9Q99956 384 aaKnown RBP9.23□□□□□ -0.93
ATXN3-235ENST00000556082 HSD17B14Q9BPX1 270 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 TUFT1Q9NNX1 390 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-235ENST00000556082 CCPG1Q9ULG6 757 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 FRMPD4Q14CM0 1322 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 A0A1W2PQC6 194 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 CDC14CA4D256 554 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 CCP110O43303 1012 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 STX10O60499 249 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 MED24O75448 989 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 PSMD10O75832 226 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 KIF20AO95235 890 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 FGFR1OPO95684 399 aaKnown RBP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 SLC12A3P55017 1021 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 LRRC63Q05C16 580 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 SPP2Q13103 211 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 TRIM14Q14142 442 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 ZYXQ15942 572 aaKnown RBP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 B3GNT9Q6UX72 402 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 CCDC84Q86UT8 332 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 CCDC65Q8IXS2 484 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 CCAR2Q8N163 923 aaKnown RBP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 C17orf53Q8N3J3 647 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 KIAA0895Q8NCT3 520 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 TRPM4Q8TD43 1214 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 MXRA8Q9BRK3 442 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 WDR11Q9BZH6 1224 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 DNM3Q9UQ16 869 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATXN3-235ENST00000556082 MYPNQ86TC9 1320 aa9.22□□□□□ -0.93
ATXN3-235ENST00000556082 A0A1W2PRU2 124 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 AKR1B15C9JRZ8 316 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 VWA5AO00534 786 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 N4BP3O15049 544 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 ARHGAP6O43182 974 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 TEX33O43247 280 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 FLOT1O75955 427 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 EYA4O95677 639 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 CYP11B2P19099 503 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 EPS15P42566 896 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 PMS1P54277 932 aaKnown RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 PCNX4Q63HM2 1172 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 ANKRD40Q6AI12 368 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 CSGALNACT2Q8N6G5 542 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 TC2NQ8N9U0 490 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 CYP2W1Q8TAV3 490 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 ZNF507Q8TCN5 953 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 GJA10Q969M2 543 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 IQCDQ96DY2 449 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 WRNIP1Q96S55 665 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 NAA15Q9BXJ9 866 aaKnown RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 RPAP3Q9H6T3 665 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 ADARB2Q9NS39 739 aaKnown RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 PANK4Q9NVE7 773 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 MAGEC2Q9UBF1 373 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-235ENST00000556082 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 PCDHA2Q9Y5H9 948 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 MYH7BA7E2Y1 1941 aa9.21□□□□□ -0.94
ATXN3-235ENST00000556082 LGALS16A8MUM7 142 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 E9PMD0 336 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 USP2O75604 605 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 SLITRK3O94933 977 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 FCER1AP12319 257 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 TAL1P17542 331 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 STAT3P40763 770 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 DNM2P50570 870 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 COG2Q14746 738 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 EPHA7Q15375 998 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 TKFCQ3LXA3 575 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 HSP90AA4PQ58FG1 418 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms