RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MUTYHQ9UIF7 546 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 CD207Q9UJ71 328 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SMCO2A6NFE2 343 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 C9IYK1 514 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 FOSP01100 380 aaPredicted RBP16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SARSP49591 514 aaKnown RBP16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RBM10P98175 930 aaKnown RBP16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 FAM102BQ5T8I3 360 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NIPA1Q7RTP0 329 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RNF135Q8IUD6 432 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NME8Q8N427 588 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RBM28Q9NW13 759 aaKnown RBP16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ZDBF2Q9HCK1 2354 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 KMT2EQ8IZD2 1858 aa16.37■□□□□ 0.21
CHMP4BP1-201ENST00000556017 DDX39AO00148 427 aaKnown RBP16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 HBP1O60381 514 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 C22orf31O95567 290 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 CYP3A4P08684 503 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NRIP1P48552 1158 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SLC26A2P50443 739 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ADCY7P51828 1080 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 COASYQ13057 564 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 DSC3Q14574 896 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RTN1Q16799 776 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ALYREFQ86V81 257 aaKnown RBP16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 FAM228AQ86W67 206 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 FBXL18Q96ME1 805 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RGS18Q9NS28 235 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 COL1A2P08123 1366 aa16.36■□□□□ 0.21
CHMP4BP1-201ENST00000556017 LOC730098B7Z3J9 87 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ZBTB43O43298 467 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 GPR32O75388 356 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ERVFC1P60507 584 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 FAM189BP81408 668 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NHLH1Q02575 133 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 KCNC3Q14003 757 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 PKN1Q16512 942 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 LINC01465Q8N7H1 131 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 LENG9Q96B70 501 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ADAM2Q99965 735 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 CWH43Q9H720 699 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 BARX2Q9UMQ3 279 aaPredicted RBP16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ST3GAL5Q9UNP4 418 aa16.35■□□□□ 0.21
CHMP4BP1-201ENST00000556017 M0QZ92 97 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RPS6KA5O75582 802 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 CPA1P15085 419 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NDUFV1P49821 464 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NFX1Q12986 1120 aaKnown RBP16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 CBX2Q14781 532 aaPredicted RBP16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 KIZQ2M2Z5 673 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 JAKMIP3Q5VZ66 844 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SWSAP1Q6NVH7 229 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 RBM23Q86U06 439 aaKnown RBP16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 MAFBQ9Y5Q3 323 aaPredicted RBP16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 DMDP11532 3685 aa16.34■□□□□ 0.21
CHMP4BP1-201ENST00000556017 MYO15AQ9UKN7 3530 aa16.33■□□□□ 0.21
CHMP4BP1-201ENST00000556017 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GOLGA8AA7E2F4 631 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 IPO5O00410 1097 aaKnown RBP16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 FSCN2O14926 492 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PER2O15055 1255 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PPFIA3O75145 1194 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF484Q5JVG2 852 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PDXDC2PQ6P474 469 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 SLC24A5Q71RS6 500 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 SUSD6Q92537 303 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 EDAQ92838 391 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PPP1R16BQ96T49 567 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 OSMRQ99650 979 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZMYND12Q9H0C1 365 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF302Q9NR11 478 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GINS2Q9Y248 185 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 USP15Q9Y4E8 981 aaPredicted RBP16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 NID2Q14112 1375 aa16.33■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 BACH1O14867 736 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF862O60290 1169 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 FGF18O76093 207 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 VTNP04004 478 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 FGFR1P11362 822 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 RCAN1P53805 252 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CSPP1Q1MSJ5 1256 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms