RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 MYL10Q9BUA6 226 aa7.73□□□□□ -1.17
LINC00643-204ENST00000555934 AMNQ9BXJ7 453 aa7.73□□□□□ -1.17
LINC00643-204ENST00000555934 RNF38Q9H0F5 515 aa7.73□□□□□ -1.17
LINC00643-204ENST00000555934 METTL14Q9HCE5 456 aaKnown RBP7.73□□□□□ -1.17
LINC00643-204ENST00000555934 IRS2Q9Y4H2 1338 aa7.73□□□□□ -1.17
LINC00643-204ENST00000555934 H2AFYO75367 372 aaKnown RBP7.72□□□□□ -1.17
LINC00643-204ENST00000555934 MPIG6BO95866 241 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 RGS3P49796 1198 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 ADCY1Q08828 1119 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 FAPQ12884 760 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 CT83Q5H943 113 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 TTC38Q5R3I4 469 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 PGM2L1Q6PCE3 622 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 PHYKPLQ8IUZ5 450 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 KCNN1Q92952 543 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 NOX5Q96PH1 765 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 GORASP1Q9BQQ3 440 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
LINC00643-204ENST00000555934 NGRNQ9NPE2 291 aaKnown RBP7.72□□□□□ -1.17
LINC00643-204ENST00000555934 INCENPQ9NQS7 918 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 AASDHPPTQ9NRN7 309 aa7.72□□□□□ -1.17
LINC00643-204ENST00000555934 ELL2O00472 640 aaPredicted RBP7.71□□□□□ -1.18
LINC00643-204ENST00000555934 FBXO21O94952 628 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 PRLP01236 227 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 NEK2P51955 445 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 FOXO4P98177 505 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 SMAD4Q13485 552 aaKnown RBP7.71□□□□□ -1.18
LINC00643-204ENST00000555934 MYBPC3Q14896 1274 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 CLUL1Q15846 466 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 SLFN12LQ6IEE8 588 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 OGFOD2Q6N063 350 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 CCDC62Q6P9F0 684 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 UNQ6494/PRO21346Q6UXR6 183 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 ESPNLQ6ZVH7 1005 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 B3GNT8Q7Z7M8 397 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 ZBTB46Q86UZ6 589 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 CXorf67Q86X51 503 aaPredicted RBP7.71□□□□□ -1.18
LINC00643-204ENST00000555934 NME9Q86XW9 330 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 FBXO15Q8NCQ5 510 aaPredicted RBP7.71□□□□□ -1.18
LINC00643-204ENST00000555934 IGDCC4Q8TDY8 1250 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 FERMT2Q96AC1 680 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 GCM1Q9NP62 436 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 ARHGAP20Q9P2F6 1191 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 CROTQ9UKG9 612 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 EDARQ9UNE0 448 aa7.71□□□□□ -1.18
LINC00643-204ENST00000555934 N4BP3O15049 544 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 MARCH6O60337 910 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 PRPF6O94906 941 aaKnown RBP7.7□□□□□ -1.18
LINC00643-204ENST00000555934 PARNO95453 639 aaKnown RBP7.7□□□□□ -1.18
LINC00643-204ENST00000555934 ITGA1P56199 1179 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 ALDH6A1Q02252 535 aaKnown RBP7.7□□□□□ -1.18
LINC00643-204ENST00000555934 MESP2Q0VG99 397 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 PCBP2Q15366 365 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00643-204ENST00000555934 ZBTB41Q5SVQ8 909 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 TIGD7Q6NT04 549 aaPredicted RBP7.7□□□□□ -1.18
LINC00643-204ENST00000555934 LMBR1Q8WVP7 490 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 E2F7Q96AV8 911 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 FUBP3Q96I24 572 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00643-204ENST00000555934 MAML3Q96JK9 1138 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 MENTQ9BUN1 341 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 DLL4Q9NR61 685 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 GALNT8Q9NY28 637 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 HSPBP1Q9NZL4 362 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 ZFP69BQ9UJL9 534 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 PPP2R3BQ9Y5P8 575 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 EID1Q9Y6B2 187 aa7.7□□□□□ -1.18
LINC00643-204ENST00000555934 PRSS38A1L453 326 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 K7ESF4 209 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 LPLP06858 475 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 CCND1P24385 295 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 IGFBP6P24592 240 aaPredicted RBP7.69□□□□□ -1.18
LINC00643-204ENST00000555934 GPR3P46089 330 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 DLG4P78352 724 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 ROM1Q03395 351 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 MCL1Q07820 350 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 ADAM9Q13443 819 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 NOLC1Q14978 699 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC00643-204ENST00000555934 STPG3Q8N7X2 389 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 DTX3Q8N9I9 347 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 C1orf162Q8NEQ5 155 aaPredicted RBP7.69□□□□□ -1.18
LINC00643-204ENST00000555934 ZBTB8AQ96BR9 441 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 EAF2Q96CJ1 260 aaPredicted RBP7.69□□□□□ -1.18
LINC00643-204ENST00000555934 HOOK2Q96ED9 719 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 FOXB1Q99853 325 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 QRSL1Q9H0R6 528 aaKnown RBP7.69□□□□□ -1.18
LINC00643-204ENST00000555934 MKS1Q9NXB0 559 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 KCNG1Q9UIX4 513 aa7.69□□□□□ -1.18
LINC00643-204ENST00000555934 SHTN1A0MZ66 631 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 SEMA7AO75326 666 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 FARP2O94887 1054 aaPredicted RBP7.68□□□□□ -1.18
LINC00643-204ENST00000555934 IL18BPO95998 194 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 ECE1P42892 770 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 RAB27AP51159 221 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 MANFP55145 182 aaKnown RBP7.68□□□□□ -1.18
LINC00643-204ENST00000555934 ADCY2Q08462 1091 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 RTP5Q14D33 572 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 INAVAQ3KP66 663 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 TOR2AQ5JU69 321 aa7.68□□□□□ -1.18
LINC00643-204ENST00000555934 SYDE1Q6ZW31 735 aaPredicted RBP7.68□□□□□ -1.18
LINC00643-204ENST00000555934 PNMA8AQ86V59 439 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms