RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 ATP4AP20648 1035 aa25.65■■□□□ 1.7
CDKN3-208ENST00000555837 BRAPQ7Z569 592 aa25.65■■□□□ 1.7
CDKN3-208ENST00000555837 C4orf19Q8IY42 314 aa25.65■■□□□ 1.7
CDKN3-208ENST00000555837 METTL13Q8N6R0 699 aa25.65■■□□□ 1.7
CDKN3-208ENST00000555837 WNT8BQ93098 351 aa25.65■■□□□ 1.7
CDKN3-208ENST00000555837 RNF216Q9NWF9 866 aaPredicted RBP25.65■■□□□ 1.7
CDKN3-208ENST00000555837 TRPV2Q9Y5S1 764 aa25.65■■□□□ 1.7
CDKN3-208ENST00000555837 KDM3AQ9Y4C1 1321 aa25.64■■□□□ 1.7
CDKN3-208ENST00000555837 DDX11L8A8MPP1 907 aa25.64■■□□□ 1.7
CDKN3-208ENST00000555837 ATP2A2P16615 1042 aaKnown RBP25.64■■□□□ 1.7
CDKN3-208ENST00000555837 ZNF174Q15697 407 aa25.64■■□□□ 1.7
CDKN3-208ENST00000555837 PLEKHG4Q58EX7 1191 aa25.64■■□□□ 1.7
CDKN3-208ENST00000555837 TRAF7Q6Q0C0 670 aa25.64■■□□□ 1.7
CDKN3-208ENST00000555837 RUFY4Q6ZNE9 571 aa25.64■■□□□ 1.7
CDKN3-208ENST00000555837 TRMT1LQ7Z2T5 733 aaKnown RBP25.64■■□□□ 1.7
CDKN3-208ENST00000555837 CCDC43Q96MW1 224 aaKnown RBP25.64■■□□□ 1.7
CDKN3-208ENST00000555837 RANBP2P49792 3224 aaKnown RBP25.64■■□□□ 1.69
CDKN3-208ENST00000555837 GAS2O43903 313 aaKnown RBP25.63■■□□□ 1.69
CDKN3-208ENST00000555837 ZNF862O60290 1169 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 ZNF697Q5TEC3 545 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 HAUS3Q68CZ6 603 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 BANK1Q8NDB2 785 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 TRAPPC12Q8WVT3 735 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 FTHL17Q9BXU8 183 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 IFIH1Q9BYX4 1025 aaKnown RBP25.63■■□□□ 1.69
CDKN3-208ENST00000555837 CELF4Q9BZC1 486 aaKnown RBP25.63■■□□□ 1.69
CDKN3-208ENST00000555837 PCDH10Q9P2E7 1040 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 CDY2AQ9Y6F7 541 aa25.63■■□□□ 1.69
CDKN3-208ENST00000555837 C22orf31O95567 290 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 BMP15O95972 392 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 AMHP03971 560 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 EFCAB12Q6NXP0 572 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 TSHZ1Q6ZSZ6 1077 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 SLC7A3Q8WY07 619 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 LXNQ9BS40 222 aa25.62■■□□□ 1.69
CDKN3-208ENST00000555837 EML1O00423 815 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 CHRNA1P02708 482 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 XRCC6P12956 609 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDKN3-208ENST00000555837 MUTP22033 750 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 RFC5P40937 340 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 PRPHP41219 470 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 SPIRE1Q08AE8 756 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 DBF4BQ8NFT6 615 aa25.61■■□□□ 1.69
CDKN3-208ENST00000555837 EIF2AK1Q9BQI3 630 aaKnown RBP25.61■■□□□ 1.69
CDKN3-208ENST00000555837 ZBTB42B2RXF5 422 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 LYPLA2O95372 231 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 YWHABP31946 246 aaKnown RBP25.6■■□□□ 1.69
CDKN3-208ENST00000555837 MGAT3Q09327 533 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 PDIA5Q14554 519 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 UGCGQ16739 394 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 MTERF2Q49AM1 385 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 TPH2Q8IWU9 490 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 KIAA0319LQ8IZA0 1049 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 TUFT1Q9NNX1 390 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 CXXC1Q9P0U4 656 aaPredicted RBP25.6■■□□□ 1.69
CDKN3-208ENST00000555837 AKT3Q9Y243 479 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 PCDHA11Q9Y5I1 949 aa25.6■■□□□ 1.69
CDKN3-208ENST00000555837 VPS37CA5D8V6 355 aaPredicted RBP25.59■■□□□ 1.69
CDKN3-208ENST00000555837 SOX1O00570 391 aaPredicted RBP25.59■■□□□ 1.69
CDKN3-208ENST00000555837 TECP42680 631 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 FXR2P51116 673 aaKnown RBP eCLIP25.59■■□□□ 1.69
CDKN3-208ENST00000555837 CRYBB1P53674 252 aaPredicted RBP25.59■■□□□ 1.69
CDKN3-208ENST00000555837 MBTPS1Q14703 1052 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 GPNMBQ14956 572 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 TARBP2Q15633 366 aaKnown RBP25.59■■□□□ 1.69
CDKN3-208ENST00000555837 FBXO47Q5MNV8 452 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 LRCH3Q96II8 777 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 DYDC2Q96IM9 177 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 CEP170P1Q96L14 293 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 ZBED2Q9BTP6 218 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 SUGCTQ9HAC7 445 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 CYP26B1Q9NR63 512 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 ANKEF1Q9NU02 776 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 SCN5AQ14524 2016 aa25.59■■□□□ 1.69
CDKN3-208ENST00000555837 GPR182O15218 404 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 PAK2Q13177 524 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 PTGDRQ13258 359 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 DTHD1Q6ZMT9 781 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 TCP11Q8WWU5 503 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 TIFAQ96CG3 184 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 VWCEQ96DN2 955 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 HSD17B14Q9BPX1 270 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 TMEM60Q9H2L4 133 aa25.58■■□□□ 1.69
CDKN3-208ENST00000555837 WDR81Q562E7 1941 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 MAFO75444 373 aaPredicted RBP25.57■■□□□ 1.68
CDKN3-208ENST00000555837 SLITRK3O94933 977 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 GHRP10912 638 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 DNAJB2P25686 324 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 POLGP54098 1239 aaPredicted RBP25.57■■□□□ 1.68
CDKN3-208ENST00000555837 WDR5P61964 334 aaKnown RBP25.57■■□□□ 1.68
CDKN3-208ENST00000555837 ANO5Q75V66 913 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 SCLT1Q96NL6 688 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 POLR3CQ9BUI4 534 aaPredicted RBP25.57■■□□□ 1.68
CDKN3-208ENST00000555837 INO80BQ9C086 356 aaPredicted RBP25.57■■□□□ 1.68
CDKN3-208ENST00000555837 SLC28A3Q9HAS3 691 aa25.57■■□□□ 1.68
CDKN3-208ENST00000555837 CYP4A11Q02928 519 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 LPIN1Q14693 890 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 ARL6IP4Q66PJ3 421 aaKnown RBP25.56■■□□□ 1.68
CDKN3-208ENST00000555837 HERC6Q8IVU3 1022 aa25.56■■□□□ 1.68
CDKN3-208ENST00000555837 DEFB123Q8N688 67 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms