RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NEK8Q86SG6 692 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 MAFAQ8NHW3 353 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-215ENST00000555616 ETNPPLQ8TBG4 499 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 TRAPPC12Q8WVT3 735 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 APBB2Q92870 758 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 ZBTB10Q96DT7 871 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 UIMC1Q96RL1 719 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 TEKT3Q9BXF9 490 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 IFIH1Q9BYX4 1025 aaKnown RBP10.84□□□□□ -0.67
ACTN1-215ENST00000555616 PRDM12Q9H4Q4 367 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 TRIP12Q14669 1992 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 EYSQ5T1H1 3165 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 RBAK-RBAKDNI3L0D1 243 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 SLC37A4O43826 429 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 TLL1O43897 1013 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 PSMD10O75832 226 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 ARHGEF15O94989 841 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 AMHP03971 560 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 GHRP10912 638 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 GCFC2P16383 781 aaKnown RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 ATP4AP20648 1035 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 TRAPPC10P48553 1259 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 KRT85P78386 507 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 LPIN1Q14693 890 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 ZNF484Q5JVG2 852 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 FBXO47Q5MNV8 452 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 MTHFD1LQ6UB35 978 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 TMCO2Q7Z6W1 182 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 RDM1Q8NG50 284 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 DNAJB3Q8WWF6 145 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 TNFRSF25Q93038 417 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 FAM167AQ96KS9 214 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 FAM49AQ9H0Q0 323 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 UNC45AQ9H3U1 944 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 DISC1Q9NRI5 854 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 DDX25Q9UHL0 483 aaKnown RBP10.83□□□□□ -0.68
ACTN1-215ENST00000555616 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 CDY2AQ9Y6F7 541 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 SQORQ9Y6N5 450 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 KDM3AQ9Y4C1 1321 aa10.83□□□□□ -0.68
ACTN1-215ENST00000555616 LCHNA4D1U4 455 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 ZNF862O60290 1169 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 C22orf31O95567 290 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
ACTN1-215ENST00000555616 PRKCEQ02156 737 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 TAP1Q03518 808 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 ADGRE1Q14246 886 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 UGCGQ16739 394 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 IER5Q5VY09 327 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.82□□□□□ -0.686e-6■□□□□ 8.2
ACTN1-215ENST00000555616 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 TSHZ1Q6ZSZ6 1077 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 PIK3AP1Q6ZUJ8 805 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 GAS2L1Q99501 681 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-215ENST00000555616 NAP1L4Q99733 375 aaKnown RBP10.82□□□□□ -0.68
ACTN1-215ENST00000555616 KCNMB3Q9NPA1 279 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 GABBR1Q9UBS5 961 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 TRPV2Q9Y5S1 764 aa10.82□□□□□ -0.68
ACTN1-215ENST00000555616 UNC80Q8N2C7 3258 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 MICAL3Q7RTP6 2002 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 FAM205CA6NFA0 338 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 M0QZ92 97 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 TBX3O15119 743 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 CHMP2AO43633 222 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 BAG4O95429 457 aaKnown RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 OATP04181 439 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 KLRC1P26715 233 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 HTRA4P83105 476 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 DNM1Q05193 864 aaKnown RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 EARS2Q5JPH6 523 aaKnown RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 CKAP2LQ8IYA6 745 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 MYOCDQ8IZQ8 938 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 NME8Q8N427 588 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 USP38Q8NB14 1042 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 GJA10Q969M2 543 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 FAM20AQ96MK3 541 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 RAD9AQ99638 391 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 ZBED2Q9BTP6 218 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-215ENST00000555616 VAV3Q9UKW4 847 aa10.81□□□□□ -0.68
ACTN1-215ENST00000555616 COL4A4P53420 1690 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-215ENST00000555616 LINC01553A4QN01 128 aa10.8□□□□□ -0.68
ACTN1-215ENST00000555616 BMP15O95972 392 aa10.8□□□□□ -0.68
ACTN1-215ENST00000555616 TMEM62Q0P6H9 643 aa10.8□□□□□ -0.68
ACTN1-215ENST00000555616 PPP2R5CQ13362 524 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms