RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
TDP1-212ENST00000555565 KLF18A0A0U1RQI7 1052 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 MBLAC1A4D2B0 266 aaPredicted RBP12.35□□□□□ -0.43
TDP1-212ENST00000555565 GOLGA8AA7E2F4 631 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 GOLGA8BA8MQT2 603 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 MAFGO15525 162 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 CPA1P15085 419 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 GATMP50440 423 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 ERVFC1P60507 584 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 SYCE2Q6PIF2 218 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 SEPT1Q8WYJ6 367 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 KCNB2Q92953 911 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 TLE6Q9H808 572 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
TDP1-212ENST00000555565 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
TDP1-212ENST00000555565 ARP10275 920 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 CD52P31358 61 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
TDP1-212ENST00000555565 RCAN1P53805 252 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 DUSP6Q16828 381 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 NPAS4Q8IUM7 802 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 DNAJB3Q8WWF6 145 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 PCYT2Q99447 389 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 MXRA8Q9BRK3 442 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 CDY2AQ9Y6F7 541 aa12.34□□□□□ -0.43
TDP1-212ENST00000555565 SMCO2A6NFE2 343 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 hCG_1984214I3L0E3 225 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 FSCN2O14926 492 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 BRD1O95696 1058 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
TDP1-212ENST00000555565 MARK3P27448 753 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 HSPA4P34932 840 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 ID4P47928 161 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 CLK2P49760 499 aaKnown RBP12.33□□□□□ -0.44
TDP1-212ENST00000555565 ADCY7P51828 1080 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 PPFIA1Q13136 1202 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 PAN2Q504Q3 1202 aaKnown RBP12.33□□□□□ -0.44
TDP1-212ENST00000555565 FRMD5Q7Z6J6 570 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 ZNF713Q8N859 430 aaPredicted RBP12.33□□□□□ -0.44
TDP1-212ENST00000555565 KREMEN2Q8NCW0 462 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 GLG1Q92896 1179 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 SMOC2Q9H3U7 446 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 SMARCAD1Q9H4L7 1026 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
TDP1-212ENST00000555565 TMEM260Q9NX78 707 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 CDH22Q9UJ99 828 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
TDP1-212ENST00000555565 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
TDP1-212ENST00000555565 MEIS1O00470 390 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 SREBF1P36956 1147 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
TDP1-212ENST00000555565 FGD1P98174 961 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 UBE3AQ05086 875 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 GRIK4Q16099 956 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 CEP55Q53EZ4 464 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 ANKRD54Q6NXT1 300 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 Q6ZUG5 572 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 RASGRP4Q8TDF6 673 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 BRF1Q92994 677 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
TDP1-212ENST00000555565 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 PADI3Q9ULW8 664 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 NFASCO94856 1347 aa12.32□□□□□ -0.44
TDP1-212ENST00000555565 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 CCDC196A0A1B0GTZ2 297 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 ACTR2P61160 394 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 MRPS6P82932 125 aaKnown RBP12.31□□□□□ -0.44
TDP1-212ENST00000555565 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
TDP1-212ENST00000555565 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 PFKFB3Q16875 520 aaPredicted RBP12.31□□□□□ -0.44
TDP1-212ENST00000555565 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 UBALD2Q8IYN6 164 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 ADSSL1Q8N142 457 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
TDP1-212ENST00000555565 CDCA3Q99618 268 aaPredicted RBP12.31□□□□□ -0.44
TDP1-212ENST00000555565 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
TDP1-212ENST00000555565 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms