RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FIGNQ5HY92 759 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 FAM209AQ5JX71 171 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 DPH6Q7L8W6 267 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 GPR135Q8IZ08 494 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 FBXW5Q969U6 566 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 FAM89AQ96GI7 184 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 ARHGAP28Q9P2N2 729 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 HECAQ9UBI9 543 aaPredicted RBP5.91□□□□□ -1.46
SNX6-204ENST00000555541 ATP23Q9Y6H3 246 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 AQP7O14520 342 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 CLASP2O75122 1294 aaKnown RBP5.9□□□□□ -1.46
SNX6-204ENST00000555541 MAKP20794 623 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 GJA4P35212 333 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 ADCY8P40145 1251 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 KCNQ1P51787 676 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 HERVK_113P62684 666 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 HGFACQ04756 655 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 TM4SF20Q53R12 229 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 TMEM200BQ69YZ2 307 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 LRSAM1Q6UWE0 723 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 USP30Q70CQ3 517 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 OR14A2Q96R54 314 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 BTBD2Q9BX70 525 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.46
SNX6-204ENST00000555541 CDC42EP3Q9UKI2 254 aa5.9□□□□□ -1.46
SNX6-204ENST00000555541 KCNK3O14649 394 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 ADRA1BP35368 520 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 CD83Q01151 205 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 PCOLCEQ15113 449 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 ZNF568Q3ZCX4 644 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 FSTL4Q6MZW2 842 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 BCL6BQ8N143 479 aaPredicted RBP5.89□□□□□ -1.47
SNX6-204ENST00000555541 ZBTB38Q8NAP3 1195 aaPredicted RBP5.89□□□□□ -1.47
SNX6-204ENST00000555541 EXOC2Q96KP1 924 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 PRRX2Q99811 253 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 IGSF5Q9NSI5 407 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 CATSPERZQ9NTU4 200 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 PLA2G3Q9NZ20 509 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 FBXO10Q9UK96 956 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 PCDHA9Q9Y5H5 950 aa5.89□□□□□ -1.47
SNX6-204ENST00000555541 TRBV23-1A0A0A0MS06 115 aa5.88□□□□□ -1.47
SNX6-204ENST00000555541 HMGCRP04035 888 aa5.88□□□□□ -1.47
SNX6-204ENST00000555541 RPS19P39019 145 aaKnown RBP5.88□□□□□ -1.47
SNX6-204ENST00000555541 ATXN1P54253 815 aaKnown RBP5.88□□□□□ -1.47
SNX6-204ENST00000555541 SPTY2D1Q68D10 685 aaPredicted RBP5.88□□□□□ -1.47
SNX6-204ENST00000555541 ZNF428Q96B54 188 aa5.88□□□□□ -1.47
SNX6-204ENST00000555541 MSL2Q9HCI7 577 aa5.88□□□□□ -1.47
SNX6-204ENST00000555541 RASSF10A6NK89 507 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 FOXN1O15353 648 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 PDPK1O15530 556 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 DIAPH1O60610 1272 aaKnown RBP5.87□□□□□ -1.47
SNX6-204ENST00000555541 SRGAP2CP0DJJ0 459 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 KRT15P19012 456 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 MSX2P35548 267 aaPredicted RBP5.87□□□□□ -1.47
SNX6-204ENST00000555541 ECE1P42892 770 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 GUCY1A3Q02108 690 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 MTDHQ86UE4 582 aaKnown RBP5.87□□□□□ -1.47
SNX6-204ENST00000555541 NOSTRINQ8IVI9 506 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 C12orf65Q9H3J6 166 aaKnown RBP5.87□□□□□ -1.47
SNX6-204ENST00000555541 AURKAIP1Q9NWT8 199 aaPredicted RBP5.87□□□□□ -1.47
SNX6-204ENST00000555541 UCKL1Q9NWZ5 548 aa5.87□□□□□ -1.47
SNX6-204ENST00000555541 PUF60Q9UHX1 559 aaKnown RBP5.87□□□□□ -1.47
SNX6-204ENST00000555541 A0A0G2JNJ9 132 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 CCDC66A2RUB6 948 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 PMS2P1A4D2B8 440 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 CRTAMO95727 393 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 FAM153BP0C7A2 387 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 LMO1P25800 156 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 MRE11P49959 708 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 KRTAP10-11P60412 298 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 SUMO1P63165 101 aaKnown RBP5.86□□□□□ -1.47
SNX6-204ENST00000555541 MOGSQ13724 837 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 CRY1Q16526 586 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 CCDC142Q17RM4 750 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 FILIP1Q7Z7B0 1213 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 CCDC113Q9H0I3 377 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 TLR9Q9NR96 1032 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 Q9UFV3 132 aa5.86□□□□□ -1.47
SNX6-204ENST00000555541 CCDC9Q9Y3X0 531 aaKnown RBP5.86□□□□□ -1.47
SNX6-204ENST00000555541 MMEP08473 750 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 HIBADHP31937 336 aaKnown RBP5.85□□□□□ -1.47
SNX6-204ENST00000555541 KRTAP10-9P60411 292 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 TMPRSS6Q8IU80 811 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
SNX6-204ENST00000555541 NTN5Q8WTR8 489 aaPredicted RBP5.85□□□□□ -1.47
SNX6-204ENST00000555541 ASB15Q8WXK1 588 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 DLG3Q92796 817 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 OR10A5Q9H207 317 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 NELFAQ9H3P2 528 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 PFDN2Q9UHV9 154 aa5.85□□□□□ -1.47
SNX6-204ENST00000555541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.84□□□□□ -1.47
SNX6-204ENST00000555541 PRAMEF25A6NGN4 478 aa5.84□□□□□ -1.47
SNX6-204ENST00000555541 RAMP2O60895 175 aa5.84□□□□□ -1.47
SNX6-204ENST00000555541 KCNA6P17658 529 aa5.84□□□□□ -1.47
SNX6-204ENST00000555541 PROZP22891 400 aa5.84□□□□□ -1.47
SNX6-204ENST00000555541 GABREP78334 506 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms