RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 C17orf102A2RUQ5 167 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 TMEM150BA6NC51 233 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 VWA3AA6NCI4 1184 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 HAS3O00219 553 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 CDK7P50613 346 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 PRKCEQ02156 737 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 HIC1Q14526 733 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 CAMK4Q16566 473 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 MROH7Q68CQ1 1323 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 ADALQ6DHV7 355 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 NFRKBQ6P4R8 1299 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 EMSYQ7Z589 1322 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 EIF2AK1Q9BQI3 630 aaKnown RBP11.02□□□□□ -0.65
PSEN1-213ENST00000555386 PRKAG2Q9UGJ0 569 aa11.02□□□□□ -0.65
PSEN1-213ENST00000555386 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-213ENST00000555386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
PSEN1-213ENST00000555386 IGKV6D-21A0A0A0MT36 114 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 PP2D1A8MPX8 630 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 TREHO43280 583 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ZNF862O60290 1169 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 KINO60870 393 aaKnown RBP11.01□□□□□ -0.65
PSEN1-213ENST00000555386 CLTBP09497 229 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 INSRRP14616 1297 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ATP4AP20648 1035 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 CDC25AP30304 524 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ATP2C1P98194 919 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-213ENST00000555386 SPIRE1Q08AE8 756 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 FAAP100Q0VG06 881 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ORC2Q13416 577 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-213ENST00000555386 SNX17Q15036 470 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 EPHA7Q15375 998 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 GRIK4Q16099 956 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 IL17AQ16552 155 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 MTERF2Q49AM1 385 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ANO6Q4KMQ2 910 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-213ENST00000555386 FAM126BQ8IXS8 530 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 SLC43A3Q8NBI5 491 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ENGASEQ8NFI3 743 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 ATP6V0A1Q93050 837 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 LXNQ9BS40 222 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 PDLIM7Q9NR12 457 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-213ENST00000555386 LRWD1Q9UFC0 647 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 CEP131Q9UPN4 1083 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
PSEN1-213ENST00000555386 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
PSEN1-213ENST00000555386 SCN5AQ14524 2016 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 TRIM43BA6NCK2 446 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 H0YGN5 161 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 ZBTB39O15060 712 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 OATP04181 439 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 RAG1P15918 1043 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 QARSP47897 775 aaKnown RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 ME1P48163 572 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 PSMC5P62195 406 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 SNW1Q13573 536 aaKnown RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 STK38Q15208 465 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 STX1AQ16623 288 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 SPECC1Q5M775 1068 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 B3GNT9Q6UX72 402 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 ANKRD33Q7Z3H0 272 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 LINC00301Q8NCQ3 95 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 RDM1Q8NG50 284 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 AFAP1L1Q8TED9 768 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 PLIN2Q99541 437 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 FAM49AQ9H0Q0 323 aaPredicted RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 CBX8Q9HC52 389 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 WRAP73Q9P2S5 460 aaPredicted RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 MAFBQ9Y5Q3 323 aaPredicted RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 UMODL1Q5DID0 1318 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 IGSF9BQ9UPX0 1349 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 HBP1O60381 514 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 P4HBP07237 508 aaKnown RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 GNAT1P11488 350 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 CYP2C18P33260 490 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 CCT6AP40227 531 aaKnown RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 ZNF165P49910 485 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 CCL23P55773 120 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 GRIN1Q05586 938 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 C1orf53Q5VUE5 145 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 METTL13Q8N6R0 699 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 PIGOQ8TEQ8 1089 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 CCDC43Q96MW1 224 aaKnown RBP11□□□□□ -0.65
PSEN1-213ENST00000555386 PPP1R16BQ96T49 567 aa11□□□□□ -0.65
PSEN1-213ENST00000555386 RAB34Q9BZG1 259 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms