RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ME3Q16798 604 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 NEK8Q86SG6 692 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 SUGCTQ9HAC7 445 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 RWDD3Q9Y3V2 267 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 WDR81Q562E7 1941 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 UNC80Q8N2C7 3258 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 TDP2O95551 362 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 TMOD1P28289 359 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
VRK1-204ENST00000555351 CD52P31358 61 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 CRYBB1P53674 252 aaPredicted RBP13.35□□□□□ -0.27
VRK1-204ENST00000555351 CDC42EP1Q00587 391 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 PAK2Q13177 524 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 AAK1Q2M2I8 961 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 FAM117BQ6P1L5 589 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 CRIPAKQ8N1N5 446 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
VRK1-204ENST00000555351 UNC45AQ9H3U1 944 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
VRK1-204ENST00000555351 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
VRK1-204ENST00000555351 BRMS1Q9HCU9 246 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
VRK1-204ENST00000555351 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 COG5Q9UP83 839 aa13.35□□□□□ -0.27
VRK1-204ENST00000555351 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 TTC3P53804 2025 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 RFXAPO00287 272 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 GPR182O15218 404 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 ZNF862O60290 1169 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 DKC1O60832 514 aaKnown RBP eCLIP13.34□□□□□ -0.27
VRK1-204ENST00000555351 RB1P06400 928 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 STAG3L1P0CL83 205 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
VRK1-204ENST00000555351 MRPS5P82675 430 aaKnown RBP13.34□□□□□ -0.27
VRK1-204ENST00000555351 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 INF2Q27J81 1249 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 XKR3Q5GH77 459 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 MIER3Q7Z3K6 550 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 NPAS4Q8IUM7 802 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 LINC01465Q8N7H1 131 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 NSUN7Q8NE18 718 aaKnown RBP13.34□□□□□ -0.27
VRK1-204ENST00000555351 FBXO22Q8NEZ5 403 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 CLP1Q92989 425 aaKnown RBP13.34□□□□□ -0.27
VRK1-204ENST00000555351 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
VRK1-204ENST00000555351 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
VRK1-204ENST00000555351 MYO9BQ13459 2157 aa13.34□□□□□ -0.27
VRK1-204ENST00000555351 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 H3BNC9 293 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 GPR32O75388 356 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 RPS6KA5O75582 802 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 DGKIO75912 1065 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 UPP2O95045 317 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 SEC24BO95487 1268 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 KRT2P35908 639 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 PRKCEQ02156 737 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 TMEM62Q0P6H9 643 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.28
VRK1-204ENST00000555351 CCDC85BQ15834 202 aaPredicted RBP13.33□□□□□ -0.28
VRK1-204ENST00000555351 PTPROQ16827 1216 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 LETM2Q2VYF4 491 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 EPC2Q52LR7 807 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 FIBCD1Q8N539 461 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 PPM1EQ8WY54 764 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 ASB2Q96Q27 587 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 MAP7D2Q96T17 732 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 C17orf80Q9BSJ5 609 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 C1orf112Q9NSG2 853 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 LIMCH1Q9UPQ0 1083 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
VRK1-204ENST00000555351 SLC37A4O43826 429 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 MMP1P03956 469 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 PSMC5P62195 406 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 EFCAB12Q6NXP0 572 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 SPRED2Q7Z698 418 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 RTN4RL1Q86UN2 441 aaPredicted RBP13.32□□□□□ -0.28
VRK1-204ENST00000555351 TMEM192Q8IY95 271 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 SLFN12Q8IYM2 578 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
VRK1-204ENST00000555351 METTL13Q8N6R0 699 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 TNFRSF25Q93038 417 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 MRPL38Q96DV4 380 aaKnown RBP13.32□□□□□ -0.28
VRK1-204ENST00000555351 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
VRK1-204ENST00000555351 LLPHQ9BRT6 129 aaKnown RBP13.32□□□□□ -0.28
VRK1-204ENST00000555351 PLVAPQ9BX97 442 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 LMAN2LQ9H0V9 348 aa13.32□□□□□ -0.28
VRK1-204ENST00000555351 LOXHD1Q8IVV2 1947 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms