RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 TRIM6Q9C030 488 aaPredicted RBP17.43■□□□□ 0.38
MARK3-209ENST00000555235 AMACRQ9UHK6 382 aa17.43■□□□□ 0.38
MARK3-209ENST00000555235 SLC12A4Q9UP95 1085 aa17.43■□□□□ 0.38
MARK3-209ENST00000555235 CDK5RAP2Q96SN8 1893 aa17.43■□□□□ 0.38
MARK3-209ENST00000555235 CFAP73A6NFT4 308 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 PPFIA2O75334 1257 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 ZBTB48P10074 688 aaPredicted RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 ANXA13P27216 316 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 SATB1Q01826 763 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 PPARDQ03181 441 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 PEX26Q7Z412 305 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 SYCE1Q8N0S2 351 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 RAB17Q9H0T7 212 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 FRMPD2Q68DX3 1309 aaPredicted RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 PTK2Q05397 1052 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 GRAPQ13588 217 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 NFIXQ14938 502 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 ENOX2Q16206 610 aaKnown RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 MAB21L3Q8N8X9 362 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 CCDC63Q8NA47 563 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 TPCN2Q8NHX9 752 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 FAM212AQ96EL1 285 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 GPR101Q96P66 508 aaPredicted RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 ZNF317Q96PQ6 595 aaPredicted RBP17.42■□□□□ 0.38
MARK3-209ENST00000555235 FMO2Q99518 471 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.42■□□□□ 0.38
MARK3-209ENST00000555235 BAIAP2L1Q9UHR4 511 aa17.42■□□□□ 0.38
MARK3-209ENST00000555235 TNRC6CQ9HCJ0 1690 aaKnown RBP17.41■□□□□ 0.38
MARK3-209ENST00000555235 BUB1BO60566 1050 aaPredicted RBP17.41■□□□□ 0.38
MARK3-209ENST00000555235 FLOT1O75955 427 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 RHBDL3P58872 404 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 EBF2Q9HAK2 575 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 BATF3Q9NR55 127 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 NAGPAQ9UK23 515 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 A0A0A6YYK5 440 aaPredicted RBP17.41■□□□□ 0.38
MARK3-209ENST00000555235 PPP1R12AO14974 1030 aaPredicted RBP17.41■□□□□ 0.38
MARK3-209ENST00000555235 TTI1O43156 1089 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 SLMAPQ14BN4 828 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 SLFN11Q7Z7L1 901 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 HAS1Q92839 578 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 PANK4Q9NVE7 773 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 SAMD15Q9P1V8 674 aa17.41■□□□□ 0.38
MARK3-209ENST00000555235 RTN2O75298 545 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 MMEP08473 750 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 NUDT17P0C025 328 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PLCG2P16885 1265 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 NAA25Q14CX7 972 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PPP2R5EQ16537 467 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 ASPRV1Q53RT3 343 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 ALKBH5Q6P6C2 394 aaKnown RBP17.4■□□□□ 0.38
MARK3-209ENST00000555235 ZNF571Q7Z3V5 609 aaPredicted RBP17.4■□□□□ 0.38
MARK3-209ENST00000555235 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 TXLNGYQ9BZA5 131 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 GOLPH3Q9H4A6 298 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
MARK3-209ENST00000555235 NEBLO76041 1014 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
MARK3-209ENST00000555235 SNHG28P0DPA3 235 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 CALRP27797 417 aaKnown RBP17.4■□□□□ 0.38
MARK3-209ENST00000555235 TNNI2P48788 182 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 VPS72Q15906 364 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 HYIQ5T013 277 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PIGWQ7Z7B1 504 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PGM2Q96G03 612 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PNMA2Q9UL42 364 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 TTC7AQ9ULT0 858 aaPredicted RBP17.4■□□□□ 0.38
MARK3-209ENST00000555235 STXBP5LQ9Y2K9 1186 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 ATP8A1Q9Y2Q0 1164 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
MARK3-209ENST00000555235 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.38
MARK3-209ENST00000555235 CCDC169A6NNP5 214 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 ITGA4P13612 1032 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 CHN1P15882 459 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 PAX7P23759 505 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 MMP13P45452 471 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
MARK3-209ENST00000555235 NPEPPSP55786 919 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 PPP1R18Q6NYC8 613 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 EP400NLQ6ZTU2 488 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 CROCCP2Q86T23 111 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 VPS36Q86VN1 386 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 MDM1Q8TC05 714 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 TBC1D31Q96DN5 1066 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 FAM163AQ96GL9 167 aaPredicted RBP17.39■□□□□ 0.37
MARK3-209ENST00000555235 NSRP1Q9H0G5 558 aaKnown RBP17.39■□□□□ 0.37
MARK3-209ENST00000555235 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
MARK3-209ENST00000555235 CD209Q9NNX6 404 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 INTUQ9ULD6 942 aa17.39■□□□□ 0.37
MARK3-209ENST00000555235 GNPATO15228 680 aa17.38■□□□□ 0.37
MARK3-209ENST00000555235 CAND2O75155 1236 aa17.38■□□□□ 0.37
MARK3-209ENST00000555235 RPSAP08865 295 aaKnown RBP17.38■□□□□ 0.37
MARK3-209ENST00000555235 PRKCIP41743 596 aa17.38■□□□□ 0.37
MARK3-209ENST00000555235 KCNH2Q12809 1159 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms