RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 TECP42680 631 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 TOB1P50616 345 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 FPGSQ05932 587 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 IER5Q5VY09 327 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 SH3RF1Q7Z6J0 888 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 RPAINQ86UA6 219 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 BADQ92934 168 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 ZNF396Q96N95 335 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 NOC4LQ9BVI4 516 aaKnown RBP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 NIFKQ9BYG3 293 aaKnown RBP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 C11orf16Q9NQ32 467 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 VAV3Q9UKW4 847 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 COL1A2P08123 1366 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 LCTP09848 1927 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 MBLAC1A4D2B0 266 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-206ENST00000555046 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 M0QZ92 97 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 OATP04181 439 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 SELPP16109 830 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 KLRC1P26715 233 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 DNM2P50570 870 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
TMEM260-206ENST00000555046 ADAM17P78536 824 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 MRPS5P82675 430 aaKnown RBP11.87□□□□□ -0.51
TMEM260-206ENST00000555046 RBL2Q08999 1139 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 HAUS3Q68CZ6 603 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 TPH2Q8IWU9 490 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 C4orf19Q8IY42 314 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 KCTD17Q8N5Z5 321 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 C4orf32Q8N8J7 132 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 GJA10Q969M2 543 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 HSD17B14Q9BPX1 270 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 TUBE1Q9UJT0 475 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 MTMR6Q9Y217 621 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
TMEM260-206ENST00000555046 EPG5Q9HCE0 2579 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 FRMPD3Q5JV73 1810 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 EML1O00423 815 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 TREHO43280 583 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 LYPLA2O95372 231 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 IQCF3P0C7M6 154 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 THPOP40225 353 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 IGBP1P78318 339 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
TMEM260-206ENST00000555046 PRKCEQ02156 737 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 KRT79Q5XKE5 535 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 NACC1Q96RE7 527 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 EIF2AK1Q9BQI3 630 aaKnown RBP11.86□□□□□ -0.51
TMEM260-206ENST00000555046 POLR3CQ9BUI4 534 aaPredicted RBP11.86□□□□□ -0.51
TMEM260-206ENST00000555046 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
TMEM260-206ENST00000555046 TMEM60Q9H2L4 133 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 TUFT1Q9NNX1 390 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 LRWD1Q9UFC0 647 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
TMEM260-206ENST00000555046 FAM86C2PA6NEL3 165 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 RSPH10B2B2RC85 870 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 SLC26A4O43511 780 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 SLITRK3O94933 977 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 FGBP02675 491 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 RSPH10BP0C881 870 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
TMEM260-206ENST00000555046 CKBP12277 381 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ACTN1P12814 892 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ATP4AP20648 1035 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 RPA1P27694 616 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 CYP2C18P33260 490 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
TMEM260-206ENST00000555046 CCL23P55773 120 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ZNF200P98182 395 aaPredicted RBP11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ATP2C1P98194 919 aaPredicted RBP11.85□□□□□ -0.51
TMEM260-206ENST00000555046 SPIRE1Q08AE8 756 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 TBC1D8BQ0IIM8 1120 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 GRIN2CQ14957 1233 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ODR4Q5SWX8 454 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 C9orf50Q5SZB4 431 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 TRMT1LQ7Z2T5 733 aaKnown RBP11.85□□□□□ -0.51
TMEM260-206ENST00000555046 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 AK8Q96MA6 479 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
TMEM260-206ENST00000555046 ANKEF1Q9NU02 776 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 CFAP45Q9UL16 551 aa11.85□□□□□ -0.51
TMEM260-206ENST00000555046 KIAA1217Q5T5P2 1943 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 WNT7AO00755 349 aa11.84□□□□□ -0.51
TMEM260-206ENST00000555046 GAS2O43903 313 aaKnown RBP11.84□□□□□ -0.51
TMEM260-206ENST00000555046 YWHABP31946 246 aaKnown RBP11.84□□□□□ -0.51
TMEM260-206ENST00000555046 RFC5P40937 340 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms